Pre_GI Gene

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Host: NC_011094 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011094:1584038 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15840381584709672regulatory proteinQuickGO ontologyBLASTP
158476815857931026zinc-type alcohol dehydrogenaseQuickGO ontologyBLASTP
158576815870541287membrane transport proteinQuickGO ontologyBLASTP
158723115887871557PqaA proteinQuickGO ontologyBLASTP
158885715900981242major facilitator superfamily proteinQuickGO ontologyBLASTP
159008815915961509hypothetical proteinBLASTP
15916411592129489transcriptional regulator MarR family proteinQuickGO ontologyBLASTP
15921891592350162hypothetical proteinBLASTP
159232215934011080isomeraseQuickGO ontologyBLASTP
15934531593779327endoribonuclease L-PSPQuickGO ontologyBLASTP
15938531594137285stability protein StbEQuickGO ontologyBLASTP
15941271594375249stability protein StbDQuickGO ontologyBLASTP
15946751595133459phage membrane proteinQuickGO ontologyBLASTP
15951271595459333hypothetical proteinBLASTP
15956231596573951sefir domain-containing proteinQuickGO ontologyBLASTP
15969971597188192hypothetical protein
15975661597736171hypothetical proteinBLASTP
15981481599056909LysR substrate binding domain-containing proteinQuickGO ontologyBLASTP
159923016002109812-nitropropane dioxygenaseQuickGO ontologyBLASTP
16003771600496120hypothetical protein
160067516016821008HTH-type transcriptional regulator GalRQuickGO ontologyBLASTP
160182616032771452NaH antiporter NhaCQuickGO ontologyBLASTP
160329016044921203class I and II aminotransferaseQuickGO ontologyBLASTP
160460616066662061glycogen debranching protein GlgXQuickGO ontologyBLASTP