Pre_GI: BLASTP Hits

Some Help

Query: NC_004431:3409389:3480253 Escherichia coli CFT073, complete genome

Start: 3480253, End: 3480615, Length: 363

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
CP002797:4775780:479493447949344795296363Escherichia coli NA114, complete genomePutative transposase7e-57218
NC_011745:4862218:486790848679084868333426Escherichia coli ED1a chromosome, complete genomeputative transposase4e-56216
NC_011751:3453683:350329135032913503716426Escherichia coli UMN026 chromosome, complete genomeputative transposase4e-56216
NC_007946:4779745:481483048148304815192363Escherichia coli UTI89, complete genomehypothetical protein2e-54211
NC_010660:33109:376623766238081420Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS66 family element, orf12e-52204
CP002797:4603787:462158746215874622012426Escherichia coli NA114, complete genomeIS-66 transposase2e-49193
CU928145:4792703:479270347927034793128426Escherichia coli 55989 chromosome, complete genomeputative transposase OrfA from plasmid origin1e-48191
NC_011748:4792703:479270347927034793128426Escherichia coli 55989, complete genomeputative transposase OrfA from plasmid origin1e-48191
AP010958:5090696:509396850939685094393426Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein6e-48189
AP010958:3627355:365264736526473653072426Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein6e-48189
NC_013353:3627355:365264736526473653072426Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-48189
NC_013353:5090696:509396850939685094393426Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-48189
NC_013941:3676146:370144037014403701865426Escherichia coli O55:H7 str. CB9615 chromosome, complete genometransposase-like protein6e-48189
NC_008253:334467:341569341569341931363Escherichia coli 536, complete genomeputative IS orf5e-48189
NC_011601:3338888:336418933641893364614426Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase Orf1 of IS6822e-47187
NC_008253:334467:350210350210350572363Escherichia coli 536, complete genomeputative IS orf1e-44177
NC_014029:331919:392963392963393319357Yersinia pestis Z176003 chromosome, complete genomehypothetical protein8e-31132
NC_004431:3409389:345496234549623455399438Escherichia coli CFT073, complete genomeUnknown in putative ISEc81e-26118
NC_011751:3453683:347806134780613478498438Escherichia coli UMN026 chromosome, complete genomeputative transposase1e-26118
CU928159:30700:331343313433571438Escherichia coli str. 55989 plasmid 55989p, complete genomeconserved hypothetical protein, putative transposase IS3 family1e-26118
CU928159:30700:417434174341979237Escherichia coli str. 55989 plasmid 55989p, complete genomeconserved hypothetical protein4e-21100
CP002797:4603787:461780846178084618044237Escherichia coli NA114, complete genomePutative transposase7e-2199
NC_011353:3956630:397586439758643976022159Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeIS66 family transposase OrfA3e-1373.9
NC_002695:3852233:387278238727823872940159Escherichia coli O157:H7 str. Sakai, complete genome3e-1373.9
NC_004431:3409389:341047334104733410877405Escherichia coli CFT073, complete genomeUnknown protein encoded by ISEc8 within prophage1e-1271.6
NC_007941:11319:331303313033534405Escherichia coli UTI89 plasmid pUTI89, complete sequencehypothetical protein1e-1271.6
NC_016845:2274500:229580922958092296213405Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein6e-1269.7
NC_004337:3590323:385190438519043852578675Shigella flexneri 2a str. 301, complete genomeISSfl4 ORF11e-0961.6
NC_004851:157675:173438173438174112675Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceISSfl4 ORF11e-0961.6
NC_017319:155958:173413173413174042630Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceISSfl4 ORF11e-0961.6
NC_004741:366822:385926385926386423498Shigella flexneri 2a str. 2457T, complete genomeISSfl3 orfA4e-0960.1
NC_008258:401786:423776423776424450675Shigella flexneri 5 str. 8401, complete genomeISSfl4 ORF15e-0959.7
NC_008258:2045000:205991720599172060591675Shigella flexneri 5 str. 8401, complete genomeISSfl4 ORF15e-0959.7
NC_004337:367687:386125386125386799675Shigella flexneri 2a str. 301, complete genomeISSfl4 ORF15e-0959.7
NC_017319:155958:169634169634170308675Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceISSfl4 ORF15e-0959.7
NC_017328:385552:403989403989404663675Shigella flexneri 2002017 chromosome, complete genomeISSfl4 ORF15e-0959.7
NC_013353:5090696:511675551167555117429675Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-0858.5
NC_013353:3627355:362961136296113630285675Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-0858.5
NC_011601:3338888:334114433411443341818675Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase Orf1 of IS6831e-0858.5
AP010958:5090696:511675551167555117429675Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-0858.5
AP010958:3627355:362961136296113630285675Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-0858.5
NC_002655:3919545:392180139218013922475675Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by ISEc83e-0857.4
NC_002695:3852233:385448938544893855163675Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-0857.4
NC_011353:3956630:395888639588863959560675Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeISSfl4 ORF13e-0857.4
NC_013008:3911356:391361239136123914286675Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein3e-0857.4
NC_004851:157675:169705169705170379675Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceISSfl4 ORF14e-0856.6
NC_013941:3676146:367840236784023679076675Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeISSfl3 OrfA8e-0855.8
NC_010660:86445:950599505995448390Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS66 family element, orf15e-0753.1
NC_010660:33109:446374463745026390Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS66 family element, orf15e-0753.1
NC_009788:16360:182921829218681390Escherichia coli E24377A plasmid pETEC_73, complete sequenceIS66 family element, orf15e-0753.1
NC_009801:2898426:294035029403502940739390Escherichia coli E24377A, complete genomeIS66 family element, orf15e-0753.1
NC_009801:1756610:176096717609671761356390Escherichia coli E24377A, complete genomeIS66 family element, orf15e-0753.1
NC_009801:1392696:140961714096171410006390Escherichia coli E24377A, complete genomeIS66 family element, orf15e-0753.1
NC_009790:42112:671896718967578390Escherichia coli E24377A plasmid pETEC_74, complete sequenceIS66 family element5e-0753.1
NC_002655:2264773:227763922776392278040402Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded in ISEc84e-0753.1
NC_004431:3409389:342716934271693427570402Escherichia coli CFT073, complete genomeUnknown protein encoded by ISEc8 within prophage4e-0753.1
NC_013361:1284579:130444313044431304844402Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein4e-0753.1
NC_013353:3853082:387813638781363878537402Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein4e-0753.1
NC_013008:1307392:132773213277321328133402Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein4e-0753.1
NC_011745:333061:335652335652336053402Escherichia coli ED1a chromosome, complete genomeputative transposase, IS3 family4e-0753.1
NC_002655:4653160:465504246550424655443402Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by ISEc8 within prophage CP-933L4e-0753.1
AP010958:3853082:387813638781363878537402Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein4e-0753.1
NC_002695:4584177:458605945860594586460402Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein4e-0753.1
NC_013716:2764550:279093027909302791607678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A6e-0752.8
NC_013716:4824541:483553548355354836212678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A6e-0752.8
NC_013716:1138441:114611011461101146787678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A6e-0752.8
NC_013716:3708415:372254337225433723220678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A6e-0752.8
NC_013716:2476334:248499424849942485671678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A6e-0752.8
NC_009801:1756610:175854817585481759012465Escherichia coli E24377A, complete genomeIS66 family element, orf17e-0752.8
NC_013361:3313284:331480333148033315450648Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein7e-0752.8
NC_013716:4306695:431035743103574311034678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A6e-0752.8
NC_013716:3327881:335750833575083358185678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A6e-0752.8
NC_013361:3867558:389845438984543898939486Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein6e-0752.8
NC_013008:4643825:464522546452254645605381Escherichia coli O157:H7 str. TW14359 chromosome, complete genometransposase, ISEc86e-0752.8
NC_002695:1794635:180913718091371809517381Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein6e-0752.8
NC_002695:3468873:348280134828013483181381Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein6e-0752.8
NC_009801:3374501:338814533881453388822678Escherichia coli E24377A, complete genomeIS66 family element, orf16e-0752.8
NC_009790:42112:442404424044917678Escherichia coli E24377A plasmid pETEC_74, complete sequenceIS66 family element, orf16e-0752.8
NC_013716:2764550:279183027918302792507678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A6e-0752.8
NC_013008:3525428:354178635417863542187402Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein8e-0752.4
NC_013008:1715831:172970317297031730104402Escherichia coli O157:H7 str. TW14359 chromosome, complete genometransposase8e-0752.4
NC_002695:1364833:138386013838601384261402Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein8e-0752.4
NC_007607:87000:116076116076116663588Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceISSfl4 ORF12e-0651.2
NC_013716:5201097:526588652658865266536651Citrobacter rodentium ICC168, complete genomeIS679 transposase A3e-0650.4
NC_016822:2940000:295990729599072960308402Shigella sonnei 53G, complete genomehypothetical protein6e-0649.7