Pre_GI: BLASTP Hits

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Query: NC_004347:4441110:4454775 Shewanella oneidensis MR-1, complete genome

Start: 4454775, End: 4455032, Length: 258

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004851:191709:195760195760196716957Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceIS630 ORF5e-1786.3
NC_016822:3485631:3497894349789434989251032Shigella sonnei 53G, complete genomeIS630 orf5e-1786.3
NC_017319:192482:195688195688196644957Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceIS630 ORF6e-1786.3
NC_012214:745302:7522477522477532871041Erwinia pyrifoliae Ep1/96, complete genometransposase7e-1785.9
NC_012214:537000:5410455410455420851041Erwinia pyrifoliae Ep1/96, complete genometransposase7e-1785.9
NC_007384:2007467:2014725201472520157561032Shigella sonnei Ss046, complete genomeIS630 ORF6e-1785.9
NC_007384:1737885:1748054174805417490851032Shigella sonnei Ss046, complete genomeIS630 ORF6e-1785.9
NC_007384:307013:3185883185883196191032Shigella sonnei Ss046, complete genomeIS630 ORF6e-1785.9
NC_007384:3383983:3383983338398333850141032Shigella sonnei Ss046, complete genomeIS630 ORF6e-1785.9
NC_016822:1818897:1827376182737618284071032Shigella sonnei 53G, complete genomeIS630 orf6e-1785.9
NC_016822:3282654:3298701329870132997321032Shigella sonnei 53G, complete genomeIS630 orf6e-1785.9
NC_009438:236424:2372692372692383001032Shewanella putrefaciens CN-32 chromosome, complete genomeIS630 orf9e-1785.5
NC_007385:157516:1607221607221617531032Shigella sonnei Ss046 plasmid pSS_046, complete sequenceIS630 ORF7e-1682.8
NC_007608:97092:100298100298100906609Shigella boydii Sb227 plasmid pSB4_227, complete sequenceIS630 ORF1e-1581.6
NC_012779:2424967:243549724354972436486990Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-1478.6
NC_012779:2856051:286125928612592862020762Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-1477
NC_009786:43331:592285922860046819Escherichia coli E24377A plasmid pETEC_80, complete sequence4e-1476.6
NC_013364:3701895:371511737151173715728612Escherichia coli O111:H- str. 11128, complete genome4e-1476.6
NC_009348:2247500:2274776227477622758071032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase8e-1475.9
NC_009348:1968826:1977019197701919780501032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase8e-1475.9
NC_009348:2631759:2642233264223326432641032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-1475.9
NC_009348:2034500:2045224204522420462551032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-1475.9
NC_009348:3261500:3270842327084232718731032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-1475.9
NC_009348:3261500:3268688326868832697191032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-1475.9
NC_009348:4135002:4157632415763241586631032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-1475.9
NC_009348:3819271:3831763383176338327941032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-1475.9
NC_009348:1663870:1679917167991716809481032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-1475.9
NC_009348:161244:1691281691281701591032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-1475.9
NC_009348:1475955:1480996148099614820271032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-1475.9
NC_009348:2362163:2381760238176023827911032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-1475.9
NC_009348:1347500:1354117135411713551481032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase9e-1475.5
NC_009350:6987:96149614106451032Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeIS630 family transposase2e-1373.9
NC_016816:2684336:270954227095422710033492Pantoea ananatis LMG 5342, complete genomeIS630 family transposase1e-1272
NC_012691:1144715:1153221115322111542401020Tolumonas auensis DSM 9187, complete genometransposase, putative4e-1166.6
NC_012691:2050957:2054975205497520559941020Tolumonas auensis DSM 9187, complete genometransposase, putative4e-1166.6
NC_005126:5188976:5188976518897651899891014Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS630 family7e-1165.9
NC_012779:2424967:244847224484722448741270Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-1065.1
NC_012779:2424967:243273824327382433289552Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-1064.7
NC_013421:2613137:262804226280422628872831Pectobacterium wasabiae WPP163, complete genome2e-1064.3
NC_010660:175200:178851178851179033183Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence3e-1063.9
NC_012779:3570720:357882835788283579379552Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-1063.5
NC_003277:22257:3292932929339661038Salmonella typhimurium LT2 plasmid pSLT, complete sequenceputative integrase protein4e-1063.5
NC_016861:22256:3292232922339591038Salmonella enterica subsp. enterica serovar Typhimurium strputative integrase4e-1063.5
NC_016745:2280375:2291970229197022930011032Oceanimonas sp. GK1 chromosome, complete genomeIS630 family transposase6e-1062.8
NC_016745:1719800:1728949172894917299801032Oceanimonas sp. GK1 chromosome, complete genomeIS630 family transposase6e-1062.8
AP010958:3627355:364082536408253641670846Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-0961.6
AP010958:5090696:510537051053705106215846Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-0961.6
NC_002655:3919545:393301739330173933862846Escherichia coli O157:H7 EDL933, complete genomeputative transposase1e-0961.6
NC_011353:3956630:397010139701013970946846Escherichia coli O157:H7 str. EC4115 chromosome, complete genome1e-0961.6
NC_013008:3911356:392482739248273925672846Escherichia coli O157:H7 str. TW14359 chromosome, complete genometransposase1e-0961.6
NC_013353:3627355:364082536408253641670846Escherichia coli O103:H2 str. 12009, complete genome1e-0961.6
NC_013353:5090696:510537051053705106215846Escherichia coli O103:H2 str. 12009, complete genome1e-0961.6
NC_002695:3852233:386576138657613866549789Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-0961.6
NC_013941:3676146:368999936899993690463465Escherichia coli O55:H7 str. CB9615 chromosome, complete genometransposase2e-0961.2
NC_002655:2264773:227403322740332274284252Escherichia coli O157:H7 EDL933, complete genomeputative transposase (partial)4e-0960.1
NC_014228:3353896:337260933726093372848240Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein8e-0958.9
NC_013956:3181421:318898531889853189218234Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-0857.8
NC_013364:5083949:509798450979845098829846Escherichia coli O111:H- str. 11128, complete genome3e-0857.4
NC_009708:915814:924763924763925350588Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeIS630 family transposase1e-0652
NC_011353:1716037:173448417344841734678195Escherichia coli O157:H7 str. EC4115 chromosome, complete genome1e-0652
NC_013361:1754346:177201017720101772204195Escherichia coli O26:H11 str. 11368 chromosome, complete genome1e-0652
NC_013364:1997891:200499220049922005186195Escherichia coli O111:H- str. 11128, complete genome1e-0652
NC_017265:2586729:259249225924922592812321Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase2e-0651.2
NC_017168:3977767:398353039835303983850321Yersinia pestis A1122 chromosome, complete genometransposase2e-0651.2
NC_009381:1682000:168942416894241689744321Yersinia pestis Pestoides F chromosome, complete genometransposase2e-0651.2
NC_005810:1467772:150412615041261504446321Yersinia pestis biovar Microtus str. 91001, complete genomeputative transposase2e-0651.2
NC_008149:2802392:280815528081552808475321Yersinia pestis Nepal516, complete genometransposase2e-0651.2
NC_004088:2966331:297209429720942972414321Yersinia pestis KIM, complete genometransposase2e-0651.2
NC_008150:844727:889085889085889405321Yersinia pestis Antiqua, complete genomeputative transposase2e-0651.2