Pre_GI: OUP Neighbours

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Query: CU928159:30700 Escherichia coli str. 55989 plasmid 55989p, complete genome

D: 28.6357

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 175




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_012780:189949Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequence77.0159 %Subject Query16.8774
NC_012780:284336Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequence76.8658 %Subject Query17.9437
NC_014253:933261Methanohalobium evestigatum Z-7303 chromosome, complete genome75.4504 %Subject ←→ Query19.4492
NC_015672:2071141*Flexistipes sinusarabici DSM 4947 chromosome, complete genome75.7047 %Subject ←→ Query20.9843
NC_015672:101878*Flexistipes sinusarabici DSM 4947 chromosome, complete genome75.625 %Subject ←→ Query21.3461
NC_014253:575360*Methanohalobium evestigatum Z-7303 chromosome, complete genome75.818 %Subject ←→ Query22.1386
NC_013517:3385166Sebaldella termitidis ATCC 33386, complete genome75.1042 %Subject ←→ Query22.406
NC_015672:699904Flexistipes sinusarabici DSM 4947 chromosome, complete genome77.1048 %Subject ←→ Query22.8964
NC_007355:923218Methanosarcina barkeri str. fusaro chromosome 1, complete sequence75.1256 %Subject ←→ Query23.5226
NC_015676:1009298Methanosalsum zhilinae DSM 4017 chromosome, complete genome75.2696 %Subject ←→ Query24.2522
NC_003901:3544712Methanosarcina mazei Go1, complete genome75.2237 %Subject ←→ Query24.6535
NC_015672:1921023*Flexistipes sinusarabici DSM 4947 chromosome, complete genome75.9344 %Subject ←→ Query24.7677
NC_013062:1141865Flavobacteriaceae bacterium 3519-10, complete genome75.7414 %Subject ←→ Query24.786
NC_013517:3948500Sebaldella termitidis ATCC 33386, complete genome75.2604 %Subject ←→ Query24.8227
NC_003901:1346281Methanosarcina mazei Go1, complete genome75.723 %Subject ←→ Query25.3405
NC_003901:2626426Methanosarcina mazei Go1, complete genome75.1685 %Subject ←→ Query25.5095
NC_013132:2523780*Chitinophaga pinensis DSM 2588, complete genome78.1985 %Subject ←→ Query25.7326
NC_013132:6385223*Chitinophaga pinensis DSM 2588, complete genome75.8915 %Subject ←→ Query25.9636
NC_013132:3081806*Chitinophaga pinensis DSM 2588, complete genome76.155 %Subject ←→ Query26.0852
NC_003901:1568000Methanosarcina mazei Go1, complete genome75.6342 %Subject ←→ Query26.0971
NC_013061:1052957*Pedobacter heparinus DSM 2366, complete genome75.049 %Subject ←→ Query26.7637
NC_015676:1663700Methanosalsum zhilinae DSM 4017 chromosome, complete genome75.0306 %Subject ←→ Query26.7875
NC_014824:366000Ruminococcus albus 7 plasmid pRUMAL01, complete sequence76.9455 %Subject ←→ Query27.0575
NC_014002:80967Methanohalophilus mahii DSM 5219 chromosome, complete genome75.1746 %Subject ←→ Query27.1612
NC_011898:2951670Clostridium cellulolyticum H10, complete genome76.1274 %Subject ←→ Query27.2009
NC_013132:705314*Chitinophaga pinensis DSM 2588, complete genome76.731 %Subject ←→ Query27.2222
NC_003901:500500Methanosarcina mazei Go1, complete genome75.723 %Subject ←→ Query27.3886
NC_003552:576500Methanosarcina acetivorans C2A, complete genome76.3787 %Subject ←→ Query27.6143
NC_013132:8871718Chitinophaga pinensis DSM 2588, complete genome75.6403 %Subject ←→ Query27.6994
NC_003901:1947491Methanosarcina mazei Go1, complete genome75.1379 %Subject ←→ Query27.8032
NC_014976:2867454Bacillus subtilis BSn5 chromosome, complete genome75.2849 %Subject ←→ Query27.8605
NC_015672:203139*Flexistipes sinusarabici DSM 4947 chromosome, complete genome76.25 %Subject ←→ Query28.0642
NC_009800:320115Escherichia coli HS, complete genome76.7157 %Subject ←→ Query28.201
NC_009800:2995958Escherichia coli HS, complete genome76.4951 %Subject ←→ Query28.2284
NC_014976:1671594Bacillus subtilis BSn5 chromosome, complete genome77.2641 %Subject ←→ Query28.2861
NC_014976:17909Bacillus subtilis BSn5 chromosome, complete genome75.3462 %Subject ←→ Query28.3033
NC_015224:2701914Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.2972 %Subject ←→ Query28.3939
NC_016047:345491Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete76.2316 %Subject ←→ Query28.4594
NC_014479:188009Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete76.8045 %Subject ←→ Query28.4703
NC_015224:1440283Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.337 %Subject ←→ Query28.5415
NC_011750:1094000Escherichia coli IAI39 chromosome, complete genome75.1103 %Subject ←→ Query28.554
NC_003552:1816864Methanosarcina acetivorans C2A, complete genome76.7647 %Subject ←→ Query28.8383
NC_000964:1474451Bacillus subtilis subsp. subtilis str. 168, complete genome75.4963 %Subject ←→ Query28.8546
NC_003552:484000Methanosarcina acetivorans C2A, complete genome76.0662 %Subject ←→ Query28.9062
NC_008346:331820*Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete75.1011 %Subject ←→ Query29.1554
NC_016047:3406488Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete77.5123 %Subject ←→ Query29.3318
NC_014479:3245126Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete76.2531 %Subject ←→ Query29.3642
NC_013132:893849*Chitinophaga pinensis DSM 2588, complete genome76.9363 %Subject ←→ Query29.4516
NC_003901:2479613Methanosarcina mazei Go1, complete genome76.2776 %Subject ←→ Query29.4801
NC_014976:627935Bacillus subtilis BSn5 chromosome, complete genome76.3082 %Subject ←→ Query29.5132
NC_014002:31293Methanohalophilus mahii DSM 5219 chromosome, complete genome75.0551 %Subject ←→ Query29.5173
NC_016047:683368Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete75.4442 %Subject ←→ Query29.6954
NC_016047:637778*Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete75.9069 %Subject ←→ Query29.7236
NC_014376:1217000Clostridium saccharolyticum WM1 chromosome, complete genome75.7812 %Subject ←→ Query29.7766
NC_010498:1117938Escherichia coli SMS-3-5, complete genome79.0257 %Subject ←→ Query29.8896
NC_013132:35061*Chitinophaga pinensis DSM 2588, complete genome75.1379 %Subject ←→ Query30.072
NC_013132:1652477*Chitinophaga pinensis DSM 2588, complete genome76.2408 %Subject ←→ Query30.1496
NC_003552:2502689*Methanosarcina acetivorans C2A, complete genome75.3186 %Subject ←→ Query30.1624
NC_014376:1879000Clostridium saccharolyticum WM1 chromosome, complete genome75.7384 %Subject ←→ Query30.1958
NC_015737:831792Clostridium sp. SY8519, complete genome75.3676 %Subject ←→ Query30.2286
NC_014976:170683Bacillus subtilis BSn5 chromosome, complete genome76.1121 %Subject ←→ Query30.5255
NC_000964:3658000Bacillus subtilis subsp. subtilis str. 168, complete genome76.2653 %Subject ←→ Query30.7728
NC_013132:1165218*Chitinophaga pinensis DSM 2588, complete genome76.008 %Subject ←→ Query30.8148
NC_013132:7204082*Chitinophaga pinensis DSM 2588, complete genome77.4112 %Subject ←→ Query30.9942
NC_002655:1103991Escherichia coli O157:H7 EDL933, complete genome76.9393 %Subject ←→ Query31.019
NC_014376:3399366*Clostridium saccharolyticum WM1 chromosome, complete genome75.0521 %Subject ←→ Query31.1175
NC_015160:1055220Odoribacter splanchnicus DSM 20712 chromosome, complete genome75.1746 %Subject ←→ Query31.1607
NC_002695:1417912Escherichia coli O157:H7 str. Sakai, complete genome76.7524 %Subject ←→ Query31.3382
NC_012691:2050957*Tolumonas auensis DSM 9187, complete genome75.3339 %Subject ←→ Query31.4446
NC_009012:2706755Clostridium thermocellum ATCC 27405, complete genome76.011 %Subject ←→ Query31.5035
NC_007946:1632025Escherichia coli UTI89, complete genome76.1857 %Subject ←→ Query31.5613
NC_013216:3473119Desulfotomaculum acetoxidans DSM 771, complete genome76.1489 %Subject ←→ Query31.6148
NC_010468:2265423*Escherichia coli ATCC 8739, complete genome75.0184 %Subject ←→ Query31.6845
NC_014219:2284000Bacillus selenitireducens MLS10 chromosome, complete genome75.8333 %Subject ←→ Query31.7181
NC_013132:7954000*Chitinophaga pinensis DSM 2588, complete genome75.6311 %Subject ←→ Query31.7994
NC_014551:1872000Bacillus amyloliquefaciens DSM 7, complete genome76.7831 %Subject ←→ Query32.1659
NC_016047:3599095Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete76.7371 %Subject ←→ Query32.4227
NC_014479:3452484Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete77.3346 %Subject ←→ Query32.4894
NC_008253:4735418Escherichia coli 536, complete genome84.5006 %Subject ←→ Query32.6562
NC_016047:4108910Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete76.155 %Subject ←→ Query32.807
NC_011750:4947500*Escherichia coli IAI39 chromosome, complete genome75.9804 %Subject ←→ Query32.9361
NC_015672:788417*Flexistipes sinusarabici DSM 4947 chromosome, complete genome76.5656 %Subject ←→ Query32.9442
NC_009725:1787262Bacillus amyloliquefaciens FZB42, complete genome75.2911 %Subject ←→ Query32.9617
NC_014976:2735423*Bacillus subtilis BSn5 chromosome, complete genome75.5913 %Subject ←→ Query33.0378
CP002516:2305659*Escherichia coli KO11, complete genome75.1409 %Subject ←→ Query33.0931
NC_000913:1188999*Escherichia coli K12, complete genome75.3217 %Subject ←→ Query33.149
NC_010102:2762304Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,79.1728 %Subject ←→ Query33.1712
NC_014976:2420000Bacillus subtilis BSn5 chromosome, complete genome77.0067 %Subject ←→ Query33.5606
NC_015589:1439794*Desulfotomaculum ruminis DSM 2154 chromosome, complete genome75.6066 %Subject ←→ Query33.7336
NC_010067:892729*Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete77.4295 %Subject ←→ Query33.9375
NC_016047:3632489Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete76.7463 %Subject ←→ Query34.0296
NC_010498:2278306Escherichia coli SMS-3-5, complete genome76.6452 %Subject ←→ Query34.2186
NC_008253:334467*Escherichia coli 536, complete genome75.2175 %Subject ←→ Query34.2564
NC_014376:597000Clostridium saccharolyticum WM1 chromosome, complete genome75.0766 %Subject ←→ Query34.2841
AC_000091:558920Escherichia coli W3110 DNA, complete genome75.5484 %Subject ←→ Query34.3271
NC_007946:4779745Escherichia coli UTI89, complete genome81.8719 %Subject ←→ Query34.3298
CU928145:1408280*Escherichia coli 55989 chromosome, complete genome75.3799 %Subject ←→ Query34.5817
NC_011748:1408280*Escherichia coli 55989, complete genome75.3799 %Subject ←→ Query34.5817
NC_000913:558920*Escherichia coli K12, complete genome76.348 %Subject ←→ Query34.6124
NC_010473:498252*Escherichia coli str. K-12 substr. DH10B, complete genome76.2408 %Subject ←→ Query34.6343
NC_013421:701005Pectobacterium wasabiae WPP163, complete genome75.7506 %Subject ←→ Query35.2447
NC_008253:296500Escherichia coli 536, complete genome79.1391 %Subject ←→ Query35.2505
NC_014976:759129Bacillus subtilis BSn5 chromosome, complete genome75.5116 %Subject ←→ Query35.2757
NC_009725:496443*Bacillus amyloliquefaciens FZB42, complete genome76.9332 %Subject ←→ Query35.4002
NC_010498:2555706Escherichia coli SMS-3-5, complete genome75.6219 %Subject ←→ Query35.8686
NC_008563:1217804Escherichia coli APEC O1, complete genome75.383 %Subject ←→ Query35.9491
NC_011083:4547825Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,75.7506 %Subject ←→ Query36.0169
NC_014507:1403000Methanoplanus petrolearius DSM 11571 chromosome, complete genome75.2604 %Subject ←→ Query36.2716
NC_008563:3332114Escherichia coli APEC O1, complete genome78.3548 %Subject ←→ Query36.3496
NC_004431:2747237Escherichia coli CFT073, complete genome76.1673 %Subject ←→ Query36.3806
NC_009786:43331Escherichia coli E24377A plasmid pETEC_80, complete sequence82.5766 %Subject ←→ Query36.4529
AC_000091:1191353*Escherichia coli W3110 DNA, complete genome75.2911 %Subject ←→ Query36.4616
NC_008253:3941938*Escherichia coli 536, complete genome81.2255 %Subject ←→ Query36.7085
NC_012108:2874831Desulfobacterium autotrophicum HRM2, complete genome75.0031 %Subject ←→ Query36.7157
NC_015224:3587500Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.0888 %Subject ←→ Query36.7592
NC_002655:3538656*Escherichia coli O157:H7 EDL933, complete genome78.5723 %Subject ←→ Query36.7786
NC_002695:3468873*Escherichia coli O157:H7 str. Sakai, complete genome79.1728 %Subject ←→ Query36.813
NC_011751:1446073Escherichia coli UMN026 chromosome, complete genome75.1532 %Subject ←→ Query37.0661
NC_002655:1448605Escherichia coli O157:H7 EDL933, complete genome77.9871 %Subject ←→ Query37.1546
NC_014170:57954Xenorhabdus nematophila ATCC 19061 plasmid XNC1_p, complete78.0208 %Subject ←→ Query37.1734
NC_004431:1166568Escherichia coli CFT073, complete genome79.0931 %Subject ←→ Query37.2232
NC_009801:2898426*Escherichia coli E24377A, complete genome79.2402 %Subject ←→ Query37.4412
NC_002695:1364833Escherichia coli O157:H7 str. Sakai, complete genome77.3683 %Subject ←→ Query37.7023
NC_015977:2920500Roseburia hominis A2-183 chromosome, complete genome77.2978 %Subject ←→ Query37.7098
NC_011751:3453683Escherichia coli UMN026 chromosome, complete genome75.8119 %Subject ←→ Query37.7715
NC_002655:1053082Escherichia coli O157:H7 EDL933, complete genome77.8523 %Subject ←→ Query37.8144
NC_013421:1696746*Pectobacterium wasabiae WPP163, complete genome75.1562 %Subject ←→ Query37.8565
NC_003134:64672Yersinia pestis CO92 plasmid pMT1, complete sequence75.1746 %Subject ←→ Query37.9969
NC_010159:3448490Yersinia pestis Angola, complete genome76.5564 %Subject ←→ Query38.1261
NC_014551:1279229*Bacillus amyloliquefaciens DSM 7, complete genome76.2531 %Subject ←→ Query38.31
NC_005810:3142384Yersinia pestis biovar Microtus str. 91001, complete genome76.0172 %Subject Query38.9748
NC_010634:3509880Yersinia pseudotuberculosis PB1/+, complete genome76.2745 %Subject Query38.9791
NC_008149:3373229Yersinia pestis Nepal516, complete genome77.1936 %Subject Query39.0113
NC_002655:301940Escherichia coli O157:H7 EDL933, complete genome76.7004 %Subject Query39.0763
NC_006155:3596120Yersinia pseudotuberculosis IP 32953, complete genome76.4062 %Subject Query39.3877
NC_003143:875367Yersinia pestis CO92, complete genome77.2212 %Subject Query39.403
NC_004088:3505383Yersinia pestis KIM, complete genome77.3039 %Subject Query39.5232
NC_004431:279868Escherichia coli CFT073, complete genome75.7721 %Subject Query39.5292
NC_008150:513783Yersinia pestis Antiqua, complete genome75.769 %Subject Query39.6616
NC_009788:16360Escherichia coli E24377A plasmid pETEC_73, complete sequence81.0447 %Subject Query39.7806
NC_002695:301939Escherichia coli O157:H7 str. Sakai, complete genome76.0539 %Subject Query39.811
NC_010554:2872000Proteus mirabilis HI4320, complete genome75.8885 %Subject Query40.1143
NC_010067:2304313*Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete76.008 %Subject Query40.6544
NC_009725:2859630Bacillus amyloliquefaciens FZB42, complete genome75.8548 %Subject Query40.7378
NC_002695:1571389Escherichia coli O157:H7 str. Sakai, complete genome76.6575 %Subject Query41.3174
NC_002655:1655944Escherichia coli O157:H7 EDL933, complete genome76.5564 %Subject Query41.582
NC_015977:3215770*Roseburia hominis A2-183 chromosome, complete genome75.2328 %Subject Query41.94
NC_009790:42112Escherichia coli E24377A plasmid pETEC_74, complete sequence78.606 %Subject Query42.3754
NC_002655:4653160Escherichia coli O157:H7 EDL933, complete genome78.7806 %Subject Query42.393
NC_015977:2874000*Roseburia hominis A2-183 chromosome, complete genome76.7188 %Subject Query42.5037
AP010958:3669500Escherichia coli O103:H2 str. 12009 DNA, complete genome81.3235 %Subject Query42.6045
CU928145:3360967*Escherichia coli 55989 chromosome, complete genome82.1783 %Subject Query42.7659
NC_011748:3360967*Escherichia coli 55989, complete genome82.1783 %Subject Query42.7659
NC_011149:1987291*Salmonella enterica subsp. enterica serovar Agona str. SL483,78.2016 %Subject Query42.8458
AP010958:5090696*Escherichia coli O103:H2 str. 12009 DNA, complete genome78.03 %Subject Query42.8493
NC_002695:4584177Escherichia coli O157:H7 str. Sakai, complete genome77.9933 %Subject Query42.9915
CU928160:4570498*Escherichia coli IAI1 chromosome, complete genome76.4645 %Subject Query43.1129
AP010958:3627355Escherichia coli O103:H2 str. 12009 DNA, complete genome78.8266 %Subject Query43.1575
NC_002655:3769643*Escherichia coli O157:H7 EDL933, complete genome76.0662 %Subject Query43.1795
AP010958:3474077*Escherichia coli O103:H2 str. 12009 DNA, complete genome76.5625 %Subject Query43.389
NC_011751:3285646*Escherichia coli UMN026 chromosome, complete genome75.2298 %Subject Query43.64
NC_002695:3702344*Escherichia coli O157:H7 str. Sakai, complete genome76.0754 %Subject Query43.9329
NC_013961:3269368*Erwinia amylovora, complete genome76.0386 %Subject Query44.7095
NC_010694:2138000Erwinia tasmaniensis, complete genome75.2941 %Subject Query44.7597
NC_012917:1840172*Pectobacterium carotovorum subsp. carotovorum PC1, complete genome76.1336 %Subject Query45.0216
NC_010660:86445Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence79.3107 %Subject Query45.1069
NC_009792:3245368Citrobacter koseri ATCC BAA-895, complete genome76.921 %Subject Query45.1868
NC_012214:2221702*Erwinia pyrifoliae Ep1/96, complete genome76.1979 %Subject Query46.3016
NC_004631:948054*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.3676 %Subject Query46.3441
NC_004547:1873390*Erwinia carotovora subsp. atroseptica SCRI1043, complete genome79.4669 %Subject Query46.3542
NC_014839:253961*Pantoea sp. At-9b plasmid pPAT9B02, complete sequence79.1728 %Subject Query46.3854
NC_013961:1622616*Erwinia amylovora, complete genome76.97 %Subject Query46.386
NC_015663:1Enterobacter aerogenes KCTC 2190 chromosome, complete genome75.0674 %Subject Query46.7179
NC_012912:3853377*Dickeya zeae Ech1591, complete genome75.1103 %Subject Query51.5692
NC_015963:117178Enterobacter asburiae LF7a plasmid pENTAS01, complete sequence80.9896 %Subject Query52.6759