Pre_GI: BLASTP Hits

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Query: NC_008825:2063990:2064818 Methylibium petroleiphilum PM1, complete genome

Start: 2064818, End: 2067079, Length: 2262

Host Lineage: Methylibium petroleiphilum; Methylibium; ; Burkholderiales; Proteobacteria; Bacteria

General Information: Methylibium petroleiphilum strain PM1 (ATCC BAA-1232) was isolated in 1998 from the biofilter of a treatment plant in an oil refinery in Los Angeles, California, USA. Strain PM1 is capable of degrading aromatic compounds such as benzene, toluene and xylenes. Methyl tertiary-butyl ether-degrading bacterium. Methylibium petroleiphilum is a methylotroph (able to utilize reduced one-carbon compounds) able to degrade methyl tertiary-butyl ether (MTBE) under aerobic conditions. MTBE is a gasoline additive used as an oxygenate and to raise the octane number.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010163:1361217:1374513137451313759881476Acholeplasma laidlawii PG-8A chromosome, complete genomelysine decarboxylase2e-1585.1
NC_008752:3595516:3600450360045036028312382Acidovorax avenae subsp. citrulli AAC00-1, complete genomeLysine decarboxylase01224
NC_015424:4251369:4260525426052542627622238Aeromonas veronii B565 chromosome, complete genomeOrnithine decarboxylase, inducible2e-85317
NC_011989:2795811:2795811279581127981682358Agrobacterium vitis S4 chromosome 1, complete sequenceornithine decarboxylase1e-126454
NC_020453:3103549:3122535312253531248922358Agromonas oligotrophica S58 DNA, complete genomeornithine decarboxylase5e-125449
NC_014910:2779573:2779573277957327819332361Alicycliphilus denitrificans BC chromosome, complete genomelysine decarboxylase01213
NC_009633:74500:99846998461012761431Alkaliphilus metalliredigens QYMF chromosome, complete genomeOrn/Lys/Arg decarboxylase, major region1e-1999
NC_009922:411434:4352154352154366691455Alkaliphilus oremlandii OhILAs, complete genomeOrn/Lys/Arg decarboxylase major region2e-1068.2
NC_011567:1:3468934689361131425Anoxybacillus flavithermus WK1, complete genomeArginine/lysine/ornithine decarboxylase8e-1892.8
NC_014219:25845:4379243792452581467Bacillus selenitireducens MLS10 chromosome, complete genomeOrn/Lys/Arg decarboxylase major region1e-0655.8
NC_014976:2231984:2253476225347622549181443Bacillus subtilis BSn5 chromosome, complete genomeputative lysine decarboxylase9e-1995.9
NC_014171:1:3483334833362541422Bacillus thuringiensis BMB171 chromosome, complete genomearginine decarboxylase1e-21105
NC_017208:1:3438634386358071422Bacillus thuringiensis serovar chinensis CT-43 chromosome, completearginine decarboxylase3e-1997.8
NC_014652:757381:7680177680177694981482Caldicellulosiruptor hydrothermalis 108 chromosome, completeorn/lys/arg decarboxylase major region2e-20101
NC_014392:1935130:1957506195750619590381533Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeOrn/Lys/Arg decarboxylase major region5e-1997.1
NC_016012:879972:8977828977828992391458Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeOrn/Lys/Arg decarboxylase major region3e-24114
NC_010424:14657:4182241822433091488Candidatus Desulforudis audaxviator MP104C, complete genomeOrn/Lys/Arg decarboxylase, major region3e-1480.9
NC_010995:4338860:4357272435727243595242253Cellvibrio japonicus Ueda107, complete genomeprobable orn/arg/lys decarboxylase01160
NC_009792:4017510:4020136402013640222712136Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-81305
NC_013716:5201097:5273026527302652751612136Citrobacter rodentium ICC168, complete genomeornithine decarboxylase, constitutive3e-81303
NC_003030:303812:3528673528673543121446Clostridium acetobutylicum ATCC 824, complete genomeLysine decarboxylase5e-1686.7
NC_015687:303810:3528633528633543081446Clostridium acetobutylicum DSM 1731 chromosome, complete genomelysine decarboxylase5e-1686.7
NC_009495:3309550:3313006331300633144661461Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeOrn/Lys/Arg decarboxylase4e-25117
NC_009698:3185359:3186102318610231875621461Clostridium botulinum A str. Hall chromosome, complete genomeOrn/Lys/Arg decarboxylase4e-25117
NC_010674:3049500:3069278306927830706931416Clostridium botulinum B str. Eklund 17B, complete genomearginine/lysine decarboxylase7e-1686.7
NC_010516:3368951:3373629337362933750891461Clostridium botulinum B1 str. Okra, complete genomeOrn/Lys/Arg decarboxylase9e-26119
NC_012658:3387774:3391191339119133926511461Clostridium botulinum Ba4 str. 657 chromosome, complete genomeOrn/Lys/Arg decarboxylase2e-24114
NC_010723:2873886:2892952289295228943761425Clostridium botulinum E3 str. Alaska E43, complete genomearginine/lysine decarboxylase5e-1687
NC_009089:4140764:4145070414507041464791410Clostridium difficile 630, complete genomeputative arginine decarboxylase5e-1067
NC_013316:4018451:4023484402348440248931410Clostridium difficile R20291, complete genomeputative arginine decarboxylase4e-1067.4
NC_009706:3845039:3845039384503938464781440Clostridium kluyveri DSM 555 chromosome, complete genomeprotein SpeA23e-1480.9
NC_011837:3776541:3776541377654137779801440Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-1480.9
NC_015275:1:1725917259186591401Clostridium lentocellum DSM 5427 chromosome, complete genomeArginine decarboxylase4e-1067.4
NC_014328:85290:1403051403051417531449Clostridium ljungdahlii ATCC 49587 chromosome, complete genomearginine decarboxylase1e-1585.5
NC_008261:3014373:3021783302178330231801398Clostridium perfringens ATCC 13124, complete genomeOrn/Lys/Arg decarboxylase5e-0963.9
NC_008262:2649289:2663598266359826649951398Clostridium perfringens SM101, complete genomeOrn/Lys/Arg decarboxylase3e-0861.2
NC_003366:2788268:2799143279914328005731431Clostridium perfringens str. 13, complete genomeprobable lysine decarboxylase1e-1275.9
NC_014376:6296:2508925089265641476Clostridium saccharolyticum WM1 chromosome, complete genomeOrn/Lys/Arg decarboxylase major region7e-1066.6
NC_014376:386650:4070124070124084841473Clostridium saccharolyticum WM1 chromosome, complete genomeOrn/Lys/Arg decarboxylase major region1e-1068.9
NC_020291:1810527:1810527181052718119571431Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomearginine/lysine/ornithine decarboxylase4e-1584
NC_020134:1328302:1346064134606413475241461Clostridium stercorarium subsp. stercorarium DSM 8532, completearginine decarboxylase SpeA9e-1582.8
NC_020134:1941523:1960996196099619624381443Clostridium stercorarium subsp. stercorarium DSM 8532, completearginine decarboxylase SpeA4e-1894
NC_020260:263528:2840052840052861432139Cronobacter sakazakii Sp291, complete genomeornithine decarboxylase1e-81304
NC_013282:3719500:3719533371953337216712139Cronobacter turicensis, complete genomeOrnithine decarboxylase, constitutive7e-82305
NC_019903:134169:1479881479881494391452Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,arginine/lysine/ornithine decarboxylase1e-1379
NC_016584:85543:1185231185231199741452Desulfosporosinus orientis DSM 765 chromosome, complete genomearginine/lysine/ornithine decarboxylase1e-1689
NC_014500:1066911:1089233108923310913862154Dickeya dadantii 3937 chromosome, complete genomeornithine decarboxylase, constitutive9e-76285
NC_013592:956829:9792839792839814362154Dickeya dadantii Ech586, complete genomeOrnithine decarboxylase2e-78294
NC_012880:3529017:3529017352901735311702154Dickeya dadantii Ech703, complete genomeOrnithine decarboxylase1e-73278
NC_012779:305969:3154533154533177232271Edwardsiella ictaluri 93-146, complete genomeOrn/Lys/Arg decarboxylase family, putative8e-122438
NC_013508:275081:2890652890652900841020Edwardsiella tarda EIB202, complete genomeornithine decarboxylase isozyme2e-46187
NC_013508:275081:2900602900602912261167Edwardsiella tarda EIB202, complete genomeornithine decarboxylase4e-34147
NC_020063:2785652:2793233279323327953772145Enterobacteriaceae bacterium strain FGI 57, complete genomearginine/lysine/ornithine decarboxylase1e-130468
NC_004547:1062410:1076168107616810783212154Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeornithine decarboxylase, constitutive2e-76287
NC_008253:3122148:3124737312473731268722136Escherichia coli 536, complete genomeornithine decarboxylase, constitutive7e-82305
NC_008253:334467:3463563463563484822127Escherichia coli 536, complete genomelysine decarboxylase7e-129461
NC_008563:4739333:4759622475962247619912370Escherichia coli APEC O1, complete genomehypothetical protein5e-137488
NC_010468:4252940:4275850427585042779972148Escherichia coli ATCC 8739, complete genomeLysine decarboxylase5e-132472
NC_004431:4270305:4285772428577242881412370Escherichia coli CFT073, complete genomehypothetical protein5e-137488
CP002797:4411763:4432684443268444348312148Escherichia coli NA114, complete genomeLysine decarboxylase1e-131470
NC_013364:3701895:3701895370189537040302136Escherichia coli O111:H- str. 11128, complete genomeornithine decarboxylase SpeC, constitutive3e-82306
NC_013361:5319497:5322767532276753249142148Escherichia coli O26:H11 str. 11368 chromosome, complete genomelysine decarboxylase 15e-132472
NC_011742:4655373:4674284467428446766532370Escherichia coli S88 chromosome, complete genomeOrn/Lys/Arg decarboxylase5e-137488
NC_012778:2997:2242522425238281404Eubacterium eligens ATCC 27750, complete genomelysine decarboxylase3e-0758.2
NC_012673:1650139:1655223165522316566411419Exiguobacterium sp. AT1b, complete genomeOrn/Lys/Arg decarboxylase major region7e-1170.1
NC_016631:2112175:2164634216463421670782445Granulicella mallensis MP5ACTX8 chromosome, complete genomelysine decarboxylase6e-144511
NC_016845:4498097:4499394449939445015322139Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,ornithine decarboxylase2e-83311
NC_008054:1502210:1508502150850215106072106Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeOrnithine decarboxylase1e-83311
NC_008529:1514000:1519643151964315217482106Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeArginine/lysine/ornithine decarboxylase5e-84312
NC_005362:1954443:1972219197221919743182100Lactobacillus johnsonii NCC 533, complete genomeornithine decarboxylase3e-82306
NC_012559:978419:99867899867810009332256Laribacter hongkongensis HLHK9, complete genomeAdi01115
NC_012488:2719955:2740207274020727415861380Listeria monocytogenes Clip81459, complete genomelysine decarboxylase1e-0965.9
NC_003210:2749538:2770060277006027714391380Listeria monocytogenes EGD-e, complete genomehypothetical protein5e-1170.5
NC_002973:2701983:2722235272223527236141380Listeria monocytogenes str. 4b F2365, complete genomeOrn/Lys/Arg decarboxylase2e-0965.1
NC_013891:2643085:2664601266460126659801380Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeOrn/Lys/Arg decarboxylase1e-1068.9
NC_009051:1242351:1251338125133812536412304Methanoculleus marisnigri JR1, complete genomeLysine decarboxylase6e-168591
NC_015635:811500:8287988287988302191422Microlunatus phosphovorus NM-1, complete genomeputative arginine decarboxylase6e-0963.2
NC_004193:35698:3746537465388831419Oceanobacillus iheyensis HTE831, complete genomelysine decarboxylase3e-1997.4
NC_014483:3235968:3235968323596832374431476Paenibacillus polymyxa E681 chromosome, complete genomeArginine decarboxylase5e-21103
NC_014622:3525017:3526491352649135279661476Paenibacillus polymyxa SC2 chromosome, complete genomeorn/lys/arg decarboxylase major region3e-21104
NC_013406:2207520:2227312222731222287991488Paenibacillus sp. Y412MC10 chromosome, complete genomeOrn/Lys/Arg decarboxylase major region4e-23110
NC_016816:3952000:3962945396294539643301386Pantoea ananatis LMG 5342, complete genomeArginine/lysine/ornithine decarboxylase7e-1893.2
NC_013421:3752619:3752619375261937547722154Pectobacterium wasabiae WPP163, complete genomeOrnithine decarboxylase9e-77288
NC_015733:2194676:2204114220411422061622049Pseudomonas putida S16 chromosome, complete genomeornithine decarboxylase, constitutive1e-60235
NC_016818:3851542:3870201387020138723632163Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completearginine/lysine/ornithine decarboxylase2e-80301
NC_017047:3907854:3925868392586839280302163Rahnella aquatilis HX2 chromosome, complete genomeornithine decarboxylase2e-78293
NC_015061:3840463:3858477385847738606392163Rahnella sp. Y9602 chromosome, complete genomeOrnithine decarboxylase2e-78293
NC_014311:1106871:1110772111077211130512280Ralstonia solanacearum PSI07 chromosome, complete genomelysine decarboxylase (LDC)01118
NC_021066:4906239:4923478492347849256342157Raoultella ornithinolytica B6, complete genomeornithine decarboxylase3e-82306
NC_011004:2507566:2525654252565425280112358Rhodopseudomonas palustris TIE-1, complete genomeOrnithine decarboxylase2e-122440
NC_010067:3247169:3265385326538532676552271Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-137489
NC_010067:4418000:4439355443935544414902136Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-80301
NC_011149:2040396:2051599205159920529811383Salmonella enterica subsp. enterica serovar Agona str. SL483,lysine decarboxylase3e-1790.9
NC_011149:3187022:3189642318964231917772136Salmonella enterica subsp. enterica serovar Agona str. SL483,ornithine decarboxylase, constitutive9e-80298
NC_011147:3075186:3077806307780630799322127Salmonella enterica subsp. enterica serovar Paratyphi A strornithine decarboxylase1e-78295
NC_006511:3079512:3082132308213230842582127Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCornithine decarboxylase isozyme1e-78295
NC_011094:2061000:2073287207328720746691383Salmonella enterica subsp. enterica serovar Schwarzengrund strlysine decarboxylase3e-1790.9
NC_003198:3126548:3129168312916831312922125Salmonella enterica subsp. enterica serovar Typhi str. CT18,8e-44179
NC_020064:3998715:3998715399871540008772163Serratia marcescens FGI94, complete genomearginine/lysine/ornithine decarboxylase2e-82307
NC_020211:4484817:4487375448737544895432169Serratia marcescens WW4, complete genomeornithine decarboxylase4e-85316
NC_009832:4482500:4483726448372644858882163Serratia proteamaculans 568, complete genomeOrnithine decarboxylase4e-86319
NC_015566:4547702:4549336454933645514982163Serratia sp. AS12 chromosome, complete genomeOrnithine decarboxylase3e-86320
NC_017328:3088907:3088907308890730911022196Shigella flexneri 2002017 chromosome, complete genomeOrnithine decarboxylase isozyme8e-81301
NC_004741:3041294:3041294304129430434892196Shigella flexneri 2a str. 2457T, complete genomeornithine decarboxylase isozyme8e-81301
NC_004337:3049118:3049118304911830513132196Shigella flexneri 2a str. 301, complete genomeornithine decarboxylase isozyme8e-81301
NC_016884:157894:1751391751391765061368Sulfobacillus acidophilus DSM 10332 chromosome, complete genomearginine decarboxylase4e-1377.4
NC_006177:3457637:3477988347798834793971410Symbiobacterium thermophilum IAM 14863, complete genomearginine/lysine/ornithine decarboxylase2e-1584.7
NC_007513:1311957:1340010134001013414251416Synechococcus sp. CC9902, complete genomeArginine decarboxylase3e-1170.9
NC_007775:1002934:1015046101504610165811536Synechococcus sp. JA-3-3Ab, complete genomeOrn/Lys/Arg decarboxylase2e-24115
NC_005070:904751:9047519047519061571407Synechococcus sp. WH 8102, complete genomeOrn/Lys/Arg decarboxylase family 14e-0757.4
NC_008346:36176:5056250562520641503Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeOrn/Lys/Arg decarboxylase, major region6e-1273.6
NC_014964:2199252:2199252219925222006731422Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeOrn/Lys/Arg decarboxylase major region2e-20101
NC_010321:2207364:2212107221210722135281422Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeOrn/Lys/Arg decarboxylase, major region2e-20101
NC_003869:74836:9599295992974221431Thermoanaerobacter tengcongensis MB4, complete genomeArginine/lysine/ornithine decarboxylase2e-25118
NC_014410:51711:8720187201886221422Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,Orn/Lys/Arg decarboxylase major region3e-25117
NC_019970:35985:7365373653750741422Thermoanaerobacterium thermosaccharolyticum M0795, complete genomearginine/lysine/ornithine decarboxylase1e-24115
NC_015555:49842:8697586975883961422Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeArginine decarboxylase2e-25118
NC_008786:3845988:3869870386987038721882319Verminephrobacter eiseniae EF01-2, complete genomeLysine decarboxylase01219
NC_016614:1543333:1557721155772115600152295Vibrio sp. EJY3 chromosome 2, complete sequencearginine decarboxylase2e-130466
NC_016614:1543333:1560108156010815624022295Vibrio sp. EJY3 chromosome 2, complete sequenceresponse regulator receiver domain-containing protein3e-156552
NC_004459:2025436:2052055205205520541632109Vibrio vulnificus CMCP6 chromosome I, complete sequenceLysine decarboxylase5e-127455
NC_003143:1059580:1061095106109510632572163Yersinia pestis CO92, complete genomeornithine decarboxylase1e-80301
NC_004088:3689000:3689173368917336913352163Yersinia pestis KIM, complete genomeornithine decarboxylase isozyme1e-80301
NC_008149:3556999:3556999355699935593262328Yersinia pestis Nepal516, complete genomeornithine decarboxylase1e-80301
NC_006155:3805640:3807164380716438093262163Yersinia pseudotuberculosis IP 32953, complete genomeOrnithine decarboxylase2e-80300
NC_010634:3720214:3720214372021437223762163Yersinia pseudotuberculosis PB1/+, complete genomeOrn/Lys/Arg decarboxylase major region2e-80300