Pre_GI Gene

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Host: NC_006511 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006511:3079512 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
307951230805971086membrane-bound lytic murein transglycosylase CQuickGO ontologyBLASTP
308081430820701257nucleoside permeaseQuickGO ontologyBLASTP
308213230842582127ornithine decarboxylase isozymeQuickGO ontologyBLASTP
30846923085399708hypothetical proteinBLASTP
3085505308557773tRNA-PheQuickGO ontologyBLASTP
30868033086922120hypothetical proteinBLASTP
30871313087319189hypothetical proteinBLASTP
30873093087605297hypothetical proteinBLASTP
30879893088255267bacteriocin immunity proteinQuickGO ontologyBLASTP
30884983088776279bacteriocin immunity proteinQuickGO ontologyBLASTP
30891793089682504hypothetical proteinBLASTP
30899413090126186hypothetical proteinBLASTP
30903233090853531hypothetical proteinBLASTP
30908553091481627hypothetical proteinBLASTP
30916173091787171hypothetical proteinBLASTP
30919313092137207possible membrane proteinQuickGO ontologyBLASTP
30921623092389228hypothetical proteinBLASTP
30929153093598684LysR-family transcriptional regulatorQuickGO ontologyBLASTP
30937033094227525hypothetical proteinBLASTP
309423830957371500possible amino acid transport proteinQuickGO ontologyBLASTP
30959463096212267hypothetical proteinBLASTP
309633530976361302putative oxidoreductaseQuickGO ontologyBLASTP
309779830992821485possible aldehyde dehydrogenaseQuickGO ontologyBLASTP
30994183099801384putative cytoplasmic proteinQuickGO ontologyBLASTP
30997983100283486hypothetical proteinBLASTP
31010083101931924hypothetical proteinBLASTP
31019703102689720possible hydrolaseQuickGO ontologyBLASTP
310324431045481305hexuronate transporterQuickGO ontologyBLASTP