Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:1 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2813681341chromosomal replication initiator protein DnaAQuickGO ontologyBLASTP
161727231107DNA polymerase III beta subunitQuickGO ontologyBLASTP
28273033207RNA-binding S4 domain proteinQuickGO ontologyBLASTP
305241341083DNA replication and repair protein RecFQuickGO ontologyBLASTP
424661501905DNA gyrase B subunitQuickGO ontologyBLASTP
616987032535DNA gyrase A subunitQuickGO ontologyBLASTP
871697351020hypothetical proteinBLASTP
121761224873tRNA-AlaQuickGO ontologyBLASTP
154701554374tRNA-AspQuickGO ontologyBLASTP
156051567773tRNA-ValQuickGO ontologyBLASTP
156851575773tRNA-ThrQuickGO ontologyBLASTP
157921587281tRNA-TyrQuickGO ontology
159651604076tRNA-PheQuickGO ontology
160441611673tRNA-LysQuickGO ontology
1623816705468transcription elongation factor GreAQuickGO ontologyBLASTP
1679717120324hypothetical protein
17259186591401Arginine decarboxylaseQuickGO ontologyBLASTP
1882019407588guanylate kinaseQuickGO ontologyBLASTP
1992220368447protein of unknown function DUF327QuickGO ontologyBLASTP
20468214871020DNA polymerase III delta prime subunitQuickGO ontologyBLASTP
2148422380897PSP1 domain proteinQuickGO ontologyBLASTP
2234923110762methyltransferase smallQuickGO ontologyBLASTP