Pre_GI Gene

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Host: NC_011989 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011989:2795811 Agrobacterium vitis S4 chromosome 1, complete sequence

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
279581127981682358ornithine decarboxylaseQuickGO ontologyBLASTP
27982092798751543acetyltransferaseQuickGO ontologyBLASTP
27990562799289234hypothetical proteinBLASTP
279942628004661041hypothetical proteinBLASTP
28005422801516975hypothetical proteinBLASTP
280158028025871008hypothetical proteinBLASTP
28025992803573975hypothetical proteinBLASTP
280357828046331056beta-ketoacyl synthase domain-containing proteinQuickGO ontologyBLASTP
280463028056461017hypothetical proteinBLASTP
28056572805965309hypothetical protein
280609328073641272hypothetical protein
28081082808746639hypothetical protein
280874828100131266phage prohead protease HK97 familyQuickGO ontology
281002828121152088vgrG proteinQuickGO ontologyBLASTP
28126062813421816divalent cation transporterQuickGO ontologyBLASTP
28138032814414612hypothetical protein
28145902815048459hypothetical protein
28154992816293795IS21 family transposaseQuickGO ontologyBLASTP
281628328178001518IS21 family transposaseQuickGO ontologyBLASTP
28178562818008153hypothetical protein
281890528200441140hypothetical proteinBLASTP
28206592820892234hypothetical proteinBLASTP
282087328225311659transposaseQuickGO ontologyBLASTP