Pre_GI: BLASTN Hits

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Query: NC_011770:4763506 Pseudomonas aeruginosa LESB58, complete genome

Start: 4763506, End: 4789931, Length: 26426

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome019270BLASTN svgBLASTP svg
NC_004129:5481629*5481629550572324095Pseudomonas fluorescens Pf-5, complete genome01398BLASTN svgBLASTP svg
NC_004578:4465247*4465247448346018214Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-141511BLASTN svgBLASTP svg
NC_009348:3029963*3029963306659936637Aeromonas salmonicida subsp. salmonicida A449, complete genome3e-46194BLASTN svgBLASTP svg
NC_015556:4074367*4074367410534530979Pseudomonas fulva 12-X chromosome, complete genome2e-32149BLASTN svgBLASTP svg
NC_009439:860571*86057188549124921Pseudomonas mendocina ymp, complete genome2e-32149BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome3e-31145BLASTN svgBLASTP svg
NC_008060:34185134185136409922249Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence1e-30143BLASTN svgBLASTP svg
NC_007005:830467*83046785407423608Pseudomonas syringae pv. syringae B728a, complete genome4e-30141BLASTN svgBLASTP svg
NC_005773:866157*86615792659960443Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-30141BLASTN svgBLASTP svg
NC_004578:895019*89501992169226674Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-30141BLASTN svgBLASTP svg
NC_010170:50877425087742511517327432Bordetella petrii, complete genome7e-29137BLASTN svgBLASTP svg
NC_013037:5536433*5536433556659330161Dyadobacter fermentans DSM 18053, complete genome1e-27133BLASTN svgBLASTP svg
NC_007516:2383097*2383097240925926163Synechococcus sp. CC9605, complete genome2e-26129BLASTN svgBLASTP svg
NC_012912:1200000*1200000122694026941Dickeya zeae Ech1591, complete genome2e-23119BLASTN svgBLASTP svg
NC_013457:979102*97910299831619215Vibrio sp. Ex25 chromosome 2, complete genome6e-23117BLASTN svgBLASTP svg
NC_011186:515214*51521454656031347Vibrio fischeri MJ11 chromosome II, complete sequence6e-23117BLASTN svgBLASTP svg
NC_011184:2840713*2840713285859917887Vibrio fischeri MJ11 chromosome I, complete sequence6e-23117BLASTN svgBLASTP svg
NC_011184:2723000*2723000274162818629Vibrio fischeri MJ11 chromosome I, complete sequence6e-23117BLASTN svgBLASTP svg
NC_005070:2308363*2308363233088122519Synechococcus sp. WH 8102, complete genome2e-22115BLASTN svgBLASTP svg
NC_006370:768745*76874579247423730Photobacterium profundum SS9 chromosome 1, complete sequence2e-22115BLASTN svgBLASTP svg
NC_010682:70191270191272480022889Ralstonia pickettii 12J chromosome 1, complete sequence2e-22115BLASTN svgBLASTP svg
NC_003197:815964*81596483952123558Salmonella typhimurium LT2, complete genome9e-22113BLASTN svgBLASTP svg
NC_006905:848000*84800086575317754Salmonella enterica subsp. enterica serovar Choleraesuis str9e-22113BLASTN svgBLASTP svg
NC_009648:838000*83800086209024091Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome9e-22113BLASTN svgBLASTP svg
NC_010102:2287934*2287934231106023127Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,9e-22113BLASTN svgBLASTP svg
NC_010694:2565580*2565580259415428575Erwinia tasmaniensis, complete genome9e-22113BLASTN svgBLASTP svg
NC_011080:819103*81910384387224770Salmonella enterica subsp. enterica serovar Newport str. SL254,9e-22113BLASTN svgBLASTP svg
NC_011083:862901*86290188778924889Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,9e-22113BLASTN svgBLASTP svg
NC_011149:779903*77990380318023278Salmonella enterica subsp. enterica serovar Agona str. SL483,9e-22113BLASTN svgBLASTP svg
NC_012214:2673058*2673058270161428557Erwinia pyrifoliae Ep1/96, complete genome9e-22113BLASTN svgBLASTP svg
NC_019673:2635585*2635585265953723953Saccharothrix espanaensis DSM 44229 complete genome4e-21111BLASTN svgBLASTP svg
NC_013961:1246454*1246454127639829945Erwinia amylovora, complete genome4e-21111BLASTN svgBLASTP svg
NC_003143:2101902*2101902212009918198Yersinia pestis CO92, complete genome1e-20109BLASTN svgBLASTP svg
NC_004088:2691565*2691565271495023386Yersinia pestis KIM, complete genome1e-20109BLASTN svgBLASTP svg
NC_005810:1663672*1663672168742323752Yersinia pestis biovar Microtus str. 91001, complete genome1e-20109BLASTN svgBLASTP svg
NC_006155:2084669*2084669210379619128Yersinia pseudotuberculosis IP 32953, complete genome1e-20109BLASTN svgBLASTP svg
NC_008150:1384102*1384102140260518504Yersinia pestis Antiqua, complete genome1e-20109BLASTN svgBLASTP svg
NC_010159:2128157*2128157214655218396Yersinia pestis Angola, complete genome1e-20109BLASTN svgBLASTP svg
NC_010465:2582080*2582080260359921520Yersinia pseudotuberculosis YPIII, complete genome1e-20109BLASTN svgBLASTP svg
NC_012856:737170*73717079740260233Ralstonia pickettii 12D chromosome 1, complete genome2e-19105BLASTN svgBLASTP svg
NC_004547:2810151*2810151283724527095Erwinia carotovora subsp. atroseptica SCRI1043, complete genome9e-19103BLASTN svgBLASTP svg
NC_008463:52469545246954530671059757Pseudomonas aeruginosa UCBPP-PA14, complete genome9e-19103BLASTN svgBLASTP svg
NC_010552:19645719645721578619330Burkholderia ambifaria MC40-6 chromosome 2, complete sequence9e-19103BLASTN svgBLASTP svg
NC_013421:1696746*1696746172309926354Pectobacterium wasabiae WPP163, complete genome9e-19103BLASTN svgBLASTP svg
NC_015224:2061951*2061951208443822488Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,9e-19103BLASTN svgBLASTP svg
NC_016025:807226*80722682979722572Candidatus Chloracidobacterium thermophilum B chromosome chromosome9e-19103BLASTN svgBLASTP svg
NC_008340:27722327722330180624584Alkalilimnicola ehrlichei MLHE-1, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_007712:1954808*1954808197959924792Sodalis glossinidius str. 'morsitans', complete genome6e-1797.6BLASTN svgBLASTP svg
NC_007292:623765*62376565772633962Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_004547:3207776*3207776324611038335Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012880:1711062*1711062173095119890Dickeya dadantii Ech703, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012912:1701231*1701231174963148401Dickeya zeae Ech1591, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013592:1668092*1668092170683538744Dickeya dadantii Ech586, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014500:3097362*3097362318793090569Dickeya dadantii 3937 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
AP010958:2134556*2134556215269018135Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-1591.7BLASTN svgBLASTP svg
CU928160:1978500*1978500201443135932Escherichia coli IAI1 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_003902:3544743*3544743356478520043Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-1591.7BLASTN svgBLASTP svg
NC_007005:17054061705406172883623431Pseudomonas syringae pv. syringae B728a, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009053:2025782*2025782204904723266Actinobacillus pleuropneumoniae L20, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010939:2085000*2085000210600621007Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete3e-1591.7BLASTN svgBLASTP svg
NC_015186:2931000*2931000296035629357Acidiphilium multivorum AIU301, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_004129:53738865373886545259978714Pseudomonas fluorescens Pf-5, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013416:820989*82098984592424936Aggregatibacter actinomycetemcomitans D11S-1, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015571:440605*44060546793427330Porphyromonas gingivalis TDC60, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010729:265791*26579129310327313Porphyromonas gingivalis ATCC 33277, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009654:4253431*4253431427667923249Marinomonas sp. MWYL1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002950:155873*15587318325427382Porphyromonas gingivalis W83, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010475:420978*42097845009929122Synechococcus sp. PCC 7002, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014033:1691822*1691822172381531994Prevotella ruminicola 23 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007384:13550601355060138217827119Shigella sonnei Ss046, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008752:35110063511006353392522920Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008027:33873663387366341245025085Pseudomonas entomophila L48, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012803:1373500*1373500139406920570Micrococcus luteus NCTC 2665, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015737:879545*87954590287223328Clostridium sp. SY8519, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_016024:156000*15600017748221483Candidatus Chloracidobacterium thermophilum B chromosome chromosome8e-1073.8BLASTN svgBLASTP svg
NC_015738:873653*87365389323819586Eggerthella sp. YY7918, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_014926:608894*60889463891230019Thermovibrio ammonificans HB-1 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_014958:1268559*1268559129322524667Deinococcus maricopensis DSM 21211 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012526:1576775*1576775160272925955Deinococcus deserti VCD115, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007492:3462929*3462929350940646478Pseudomonas fluorescens PfO-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002929:3568106*3568106359523227127Bordetella pertussis Tohama I, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007517:1515493*1515493153676021268Geobacter metallireducens GS-15, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010939:32149232149234388122390Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete8e-0763.9BLASTN svgBLASTP svg
NC_009053:31377931377933687823100Actinobacillus pleuropneumoniae L20, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_003919:1203405*1203405123359930195Xanthomonas axonopodis pv. citri str. 306, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_007912:1173752*1173752119609122340Saccharophagus degradans 2-40, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009049:1934398*1934398196979735400Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_009952:1984955*1984955201717932225Dinoroseobacter shibae DFL 12, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014217:80040680040682559925194Starkeya novella DSM 506 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014315:11415111415113939725247Nitrosococcus watsoni C-113 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007644:1694879*1694879171885823980Moorella thermoacetica ATCC 39073, complete genome3e-0661.9BLASTN svgBLASTP svg