Pre_GI Gene

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Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:848000 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
84808384815876tRNA-LysQuickGO ontologyBLASTP
84829884837376tRNA-LysQuickGO ontologyBLASTP
84850884858376tRNA-LysQuickGO ontologyBLASTP
8488788499211044quinolinate synthetaseQuickGO ontologyBLASTP
849946850665720NMN family nucleosidepurinepyrimidine transporterQuickGO ontologyBLASTP
850662851600939zinc transporter ZitBQuickGO ontologyBLASTP
851711852097387putative homeobox proteinQuickGO ontologyBLASTP
85228885346911823-deoxy-7-phosphoheptulonate synthaseQuickGO ontologyBLASTP
853563854108546fumarate hydratase Class I anaerobicQuickGO ontologyBLASTP
854123854968846fumarate hydrataseQuickGO ontologyBLASTP
855098855988891transcriptional regulator lysR familyQuickGO ontologyBLASTP
8571968584641269putative cation transporterQuickGO ontologyBLASTP
858514858753240putative oxaloacetate decarboxylase subunit gammaQuickGO ontologyBLASTP
8587698605441776oxaloacetate decarboxylaseQuickGO ontologyBLASTP
8605578618581302putative oxalacetate decarboxylase subunit betaQuickGO ontologyBLASTP
862028862675648putative cytoplasmic proteinQuickGO ontologyBLASTP
8630558641341080putative ABC transport proteinQuickGO ontologyBLASTP
864134864910777putative ABC-type cobalaminFe3-siderophores transport system ATPase componentQuickGO ontologyBLASTP
865001865753753phosphoglyceromutaseQuickGO ontologyBLASTP