Pre_GI Gene

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Host: NC_010102 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010102:2287934 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22879342288710777hypothetical proteinBLASTP
22887102289693984hypothetical proteinBLASTP
22901692290867699hypothetical proteinBLASTP
229229922940681770hypothetical proteinBLASTP
22940842294293210hypothetical protein
229438222956501269hypothetical proteinBLASTP
22959092296856948hypothetical proteinBLASTP
22968572297747891hypothetical proteinBLASTP
22977332297837105hypothetical protein
22978772298722846hypothetical proteinBLASTP
22987402299282543hypothetical proteinBLASTP
229937623004281053hypothetical proteinBLASTP
23005932300733141hypothetical protein
23007482301134387hypothetical proteinBLASTP
23012452302183939hypothetical proteinBLASTP
23021802302899720hypothetical proteinBLASTP
230292423039581035hypothetical proteinBLASTP
23041462304307162hypothetical proteinBLASTP
2304566230463873tRNA-LysQuickGO ontologyBLASTP
2304776230484873tRNA-LysQuickGO ontologyBLASTP
2304991230506373tRNA-LysQuickGO ontologyBLASTP
23051962305348153hypothetical protein
2305282230535473tRNA-LysQuickGO ontologyBLASTP
23055192306307789hypothetical proteinBLASTP
23063172306841525hypothetical proteinBLASTP
230687623081711296hypothetical proteinBLASTP
230829223094701179hypothetical proteinBLASTP
23095352309963429hypothetical proteinBLASTP
23099672310659693hypothetical proteinBLASTP
23106562311060405hypothetical proteinBLASTP