Pre_GI Gene

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Host: NC_010475 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010475:420978 Synechococcus sp. PCC 7002, complete genome

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4209784222941317ABC transporter branched-chain amino acid transport periplasmic binding proteinQuickGO ontologyBLASTP
422514423464951ADP-ribosylglycohydrolaseQuickGO ontologyBLASTP
423471423860390hypothetical protein
4238444251121269Folylpolyglutamate synthaseQuickGO ontologyBLASTP
425165425596432hypothetical proteinBLASTP
4256264268521227glycosyl transferase group 1QuickGO ontologyBLASTP
426856427779924glycosyltransferase predictedQuickGO ontologyBLASTP
427990428412423hypothetical proteinBLASTP
428661428918258transcriptional regulator AbrB familyQuickGO ontology
428905429327423Predicted nucleic-acid-binding protein contains PIN domainQuickGO ontologyBLASTP
4294304306741245glycosyl transferase group 1 familyQuickGO ontologyBLASTP
430718431107390conserved hypothetical protein PIN domainQuickGO ontologyBLASTP
431104431331228hypothetical proteinBLASTP
431412432407996hypothetical protein
432439433425987hypothetical proteinBLASTP
433404434288885hypothetical proteinBLASTP
434457435104648conserved hypothetical protein DUF820QuickGO ontologyBLASTP
435284436153870Glycosyl transferase family 11QuickGO ontologyBLASTP
436157436840684hypothetical proteinBLASTP
436885437679795putative methyltransferaseQuickGO ontology
4377194390201302ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
439236439691456conserved hypothetical protein DUF29QuickGO ontologyBLASTP
439742440584843hypothetical proteinBLASTP
440609441433825ABC-type transport proteinQuickGO ontologyBLASTP
4416924434821791aspartyl-tRNA synthetaseQuickGO ontologyBLASTP
443613444527915heterocyst differentiation proteinQuickGO ontology
4448024459261125oxidoreductase aldoketo reductase familyQuickGO ontologyBLASTP
4459504471131164conserved hypothetical protein TPR domainQuickGO ontologyBLASTP
4471994482451047recA protein recombinase AQuickGO ontologyBLASTP
4484144500781665GTP cyclohydrolase II 34-dihydroxy-2-butanone 4-phosphate synthaseQuickGO ontologyBLASTP