Pre_GI Gene

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Host: NC_006370 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006370:768745 Photobacterium profundum SS9 chromosome 1, complete sequence

Host Lineage: Photobacterium profundum; Photobacterium; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Isolated at a depth of 2500 m from the Sulu Trough. High pressure tolerant bacterium. This bioluminescent genus was originally identified in 1878 in association with hake (a marine fish) in Cape Town, South Africa. This species was originally isolated from an amphipod homogenate enrichment from the Sulu Sea. It is a genetically tractable model system for studies of low temperature and high pressure adaptation, and has been used in studies of mono- and polyunsaturated fatty acid production under these conditions.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7687457704121668putative DNA repair protein RecNQuickGO ontologyBLASTP
770592771473882inorganic polyphosphateATP-NAD kinaseQuickGO ontologyBLASTP
771687772307621putative heat shock protein GrpEQuickGO ontologyBLASTP
7725147744331920molecular chaperone DnaKQuickGO ontologyBLASTP
7745227756641143putative DnaJ protein DnaJ-class molecular chaperone with C-terminal Zn finger domainQuickGO ontologyBLASTP
775743776123381hypothetical fimbrial assembly protein PilEQuickGO ontologyBLASTP
776216776845630hypothetical type IV pilinQuickGO ontologyBLASTP
776802777458657hypothetical proteinBLASTP
7774587787531296hypothetical proteinBLASTP
778779779147369hypothetical type IV pilinQuickGO ontologyBLASTP
78131978139476tRNA-LysQuickGO ontologyBLASTP
78146178153676tRNA-ValQuickGO ontologyBLASTP
78162878170376tRNA-AlaQuickGO ontologyBLASTP
78553778561377tRNA-AspQuickGO ontologyBLASTP
786125786688564putative transposaseQuickGO ontologyBLASTP
786690787160471putative transposase and inactivatedderivativesQuickGO ontologyBLASTP
787608788588981putative transcriptional regulator SorC familyQuickGO ontologyBLASTP
788715789551837penicillin-insensitive murein endopeptidaseQuickGO ontologyBLASTP
789602789856255putative ferredoxinQuickGO ontologyBLASTP
7898617912671407putative proteaseQuickGO ontologyBLASTP
791491792474984recombination associated proteinQuickGO ontologyBLASTP