Pre_GI: BLASTN Hits

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Query: NC_011415:600375 Escherichia coli SE11 chromosome, complete genome

Start: 600375, End: 622385, Length: 22011

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010473:498252*49825252418825937Escherichia coli str. K-12 substr. DH10B, complete genome011990BLASTN svgBLASTP svg
NC_000913:558920*55892058509926180Escherichia coli K12, complete genome011990BLASTN svgBLASTP svg
AC_000091:55892055892058720428285Escherichia coli W3110 DNA, complete genome011990BLASTN svgBLASTP svg
NC_011750:527470*52747055213724668Escherichia coli IAI39 chromosome, complete genome09616BLASTN svgBLASTP svg
NC_011740:27699612769961278959919639Escherichia fergusonii ATCC 35469, complete genome06072BLASTN svgBLASTP svg
NC_011751:643976*64397666569121716Escherichia coli UMN026 chromosome, complete genome05675BLASTN svgBLASTP svg
NC_011748:82436782436784378119415Escherichia coli 55989, complete genome05289BLASTN svgBLASTP svg
CU928145:82436782436784378119415Escherichia coli 55989 chromosome, complete genome05289BLASTN svgBLASTP svg
NC_008563:1175035*1175035119859923565Escherichia coli APEC O1, complete genome03683BLASTN svgBLASTP svg
NC_007946:1239278*1239278125938320106Escherichia coli UTI89, complete genome03683BLASTN svgBLASTP svg
NC_011751:1405381*1405381142709921719Escherichia coli UMN026 chromosome, complete genome03604BLASTN svgBLASTP svg
NC_004431:14016811401681142114919469Escherichia coli CFT073, complete genome03588BLASTN svgBLASTP svg
AP010958:5361207*5361207538029819092Escherichia coli O103:H2 str. 12009 DNA, complete genome03580BLASTN svgBLASTP svg
NC_002655:13329611332961135150618546Escherichia coli O157:H7 EDL933, complete genome03533BLASTN svgBLASTP svg
NC_002695:30193930193932873026792Escherichia coli O157:H7 str. Sakai, complete genome0846BLASTN svgBLASTP svg
NC_002655:30194030194032759925660Escherichia coli O157:H7 EDL933, complete genome0846BLASTN svgBLASTP svg
NC_015663:2807574*2807574283616128588Enterobacter aerogenes KCTC 2190 chromosome, complete genome0672BLASTN svgBLASTP svg
NC_006511:2251022*2251022227421723196Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC0670BLASTN svgBLASTP svg
NC_004631:23663352366335238728320949Salmonella enterica subsp. enterica serovar Typhi Ty2, complete0668BLASTN svgBLASTP svg
NC_020260:2725201*2725201275882333623Cronobacter sakazakii Sp291, complete genome9e-179634BLASTN svgBLASTP svg
NC_013282:12009931200993124927948287Cronobacter turicensis, complete genome3e-169603BLASTN svgBLASTP svg
NC_014837:1144500*1144500117382529326Pantoea sp. At-9b chromosome, complete genome1e-125458BLASTN svgBLASTP svg
AP010958:2911741*2911741294759935859Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-108400BLASTN svgBLASTP svg
NC_020064:1150982*1150982117040619425Serratia marcescens FGI94, complete genome9e-105389BLASTN svgBLASTP svg
NC_015567:1206727*1206727124209935373Serratia sp. AS9 chromosome, complete genome3e-89337BLASTN svgBLASTP svg
NC_015566:1206500*1206500124185935360Serratia sp. AS12 chromosome, complete genome3e-89337BLASTN svgBLASTP svg
NC_004337:309833*30983333864628814Shigella flexneri 2a str. 301, complete genome5e-88333BLASTN svgBLASTP svg
NC_009832:1280938*1280938130408723150Serratia proteamaculans 568, complete genome3e-83317BLASTN svgBLASTP svg
NC_014562:469154*46915449304023887Pantoea vagans C9-1 chromosome, complete genome4e-82313BLASTN svgBLASTP svg
NC_006905:368942*36894239327424333Salmonella enterica subsp. enterica serovar Choleraesuis str3e-80307BLASTN svgBLASTP svg
NC_011083:374000*37400039609922100Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,6e-78299BLASTN svgBLASTP svg
NC_012214:2805297*2805297283239127095Erwinia pyrifoliae Ep1/96, complete genome2e-62248BLASTN svgBLASTP svg
NC_014306:1286248*1286248131002823781Erwinia billingiae Eb661, complete genome5e-60240BLASTN svgBLASTP svg
NC_010102:24954412495441251396918529Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,8e-56226BLASTN svgBLASTP svg
NC_003198:598000*59800061851020511Salmonella enterica subsp. enterica serovar Typhi str. CT18,8e-56226BLASTN svgBLASTP svg
NC_004741:310382*31038233778027399Shigella flexneri 2a str. 2457T, complete genome1e-54222BLASTN svgBLASTP svg
NC_008258:18738051873805189655222748Shigella flexneri 5 str. 8401, complete genome1e-54222BLASTN svgBLASTP svg
NC_011149:58889558889560977120877Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-53218BLASTN svgBLASTP svg
NC_011083:654479*65447967531220834Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-53218BLASTN svgBLASTP svg
NC_003197:60604860604862559319546Salmonella typhimurium LT2, complete genome2e-53218BLASTN svgBLASTP svg
NC_011080:2761403*2761403277959918197Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-48202BLASTN svgBLASTP svg
NC_013956:12075001207500123738329884Pantoea ananatis LMG 20103 chromosome, complete genome4e-45190BLASTN svgBLASTP svg
NC_020063:2565605*2565605259927233668Enterobacteriaceae bacterium strain FGI 57, complete genome7e-44186BLASTN svgBLASTP svg
NC_015663:47674434767443479659929157Enterobacter aerogenes KCTC 2190 chromosome, complete genome2e-40174BLASTN svgBLASTP svg
NC_006905:65173265173267724625515Salmonella enterica subsp. enterica serovar Choleraesuis str6e-38167BLASTN svgBLASTP svg
NC_006511:25015002501500252217820679Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-36163BLASTN svgBLASTP svg
NC_010067:2304313*2304313233059926287Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-35159BLASTN svgBLASTP svg
NC_015663:45221094522109454904226934Enterobacter aerogenes KCTC 2190 chromosome, complete genome4e-33151BLASTN svgBLASTP svg
NC_011080:61042861042863159921172Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-27131BLASTN svgBLASTP svg
NC_008570:2014151*2014151204014925999Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-25125BLASTN svgBLASTP svg
NC_007712:1182518*1182518121806435547Sodalis glossinidius str. 'morsitans', complete genome2e-25125BLASTN svgBLASTP svg
NC_010804:1334581*1334581135591721337Burkholderia multivorans ATCC 17616 chromosome 1, complete3e-24121BLASTN svgBLASTP svg
NC_011138:3182807*3182807321165528849Alteromonas macleodii 'Deep ecotype', complete genome5e-20107BLASTN svgBLASTP svg
NC_013592:32128343212834324883336000Dickeya dadantii Ech586, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_012917:32411963241196329451553320Pectobacterium carotovorum subsp. carotovorum PC1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010465:3431500*3431500345664825149Yersinia pseudotuberculosis YPIII, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004129:4596040*4596040462128225243Pseudomonas fluorescens Pf-5, complete genome2e-1695.6BLASTN svgBLASTP svg
AP010958:60471960471962691322195Escherichia coli O103:H2 str. 12009 DNA, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_010473:62381062381065051726708Escherichia coli str. K-12 substr. DH10B, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_011751:68041768041770234121925Escherichia coli UMN026 chromosome, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_014011:962474*96247498859926126Aminobacterium colombiense DSM 12261 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_013851:2317091*2317091233893321843Allochromatium vinosum DSM 180 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014216:2538500*2538500256387025371Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_011740:27374672737467275914021674Escherichia fergusonii ATCC 35469, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009792:17701061770106179490624801Citrobacter koseri ATCC BAA-895, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_012559:978419*978419100401325595Laribacter hongkongensis HLHK9, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004578:4204235*4204235422545421220Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-1281.8BLASTN svgBLASTP svg
AC_000091:24624612462461248878526325Escherichia coli W3110 DNA, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_000913:2455037*2455037248136126325Escherichia coli K12, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009800:289000*28900031038921390Escherichia coli HS, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010473:2548946*2548946258173732792Escherichia coli str. K-12 substr. DH10B, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013421:15051761505176152341618241Pectobacterium wasabiae WPP163, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013595:81621818162181819649034310Streptosporangium roseum DSM 43021, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_013171:228356*22835625488926534Anaerococcus prevotii DSM 20548, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012526:157000*15700017910522106Deinococcus deserti VCD115, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007434:1809946*1809946187124661301Burkholderia pseudomallei 1710b chromosome I, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_007651:3064530*30645303173670109141Burkholderia thailandensis E264 chromosome I, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_009074:14706891470689150586435176Burkholderia pseudomallei 668 chromosome I, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_003317:1263562*1263562128225718696Brucella melitensis 16M chromosome I, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_012440:1841315*1841315186760426290Persephonella marina EX-H1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010520:3526883*3526883355123524353Clostridium botulinum A3 str. Loch Maree, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010674:426256*42625645229426039Clostridium botulinum B str. Eklund 17B, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010723:420025*42002544661626592Clostridium botulinum E3 str. Alaska E43, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013729:22878842287884231009922216Kribbella flavida DSM 17836, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003454:63500*6350010726843769Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete7e-0763.9BLASTN svgBLASTP svg
NC_004545:499709*49970952921829510Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007760:3848190*3848190387276224573Anaeromyxobacter dehalogenans 2CP-C, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012724:13080001308000132909921100Burkholderia glumae BGR1 chromosome 1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012778:403962*40396242480720846Eubacterium eligens ATCC 27750, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020134:1173000*1173000119554722548Clostridium stercorarium subsp. stercorarium DSM 8532, complete7e-0763.9BLASTN svgBLASTP svg
NC_020126:2883194*2883194290469121498Myxococcus stipitatus DSM 14675, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011740:62140862140864031618909Escherichia fergusonii ATCC 35469, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011661:1100576*1100576112031619741Dictyoglomus turgidum DSM 6724, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008593:2457594*2457594250471047117Clostridium novyi NT, complete genome3e-0661.9BLASTN svgBLASTP svg