Pre_GI Gene

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Host: NC_011751 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011751:1405381 Escherichia coli UMN026 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a woman with uncomplicated acute cystitis in 1999 in the USA. This strain is drug resistant. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
140538114067511371adenylosuccinate lyaseQuickGO ontologyBLASTP
14067551407396642hypothetical proteinBLASTP
140743214085381107tRNA -specific 2-thiouridylase MnmAQuickGO ontologyBLASTP
14085921409053462bifunctional thiamin pyrimidine pyrophosphate hydrolase and thiamin pyrophosphate hydrolaseQuickGO ontologyBLASTP
1409063140971665423S rRNA pseudouridine synthase EQuickGO ontologyBLASTP
140988814111381251isocitrate dehydrogenaseQuickGO ontologyBLASTP
141125214123941143phage integraseQuickGO ontologyBLASTP
14123841412620237putative excisionaseQuickGO ontologyBLASTP
14127601412999240hypothetical proteinBLASTP
14130471413265219hypothetical proteinBLASTP
14133641413663300hypothetical proteinBLASTP
14136561413847192hypothetical proteinBLASTP
14139991414679681exonuclease from phage originQuickGO ontologyBLASTP
14146761415461786recombination protein bet from phage originQuickGO ontologyBLASTP
14154671415883417Host-nuclease inhibitor protein gam from bacteriophage originQuickGO ontologyBLASTP
14158381416107270Host killing protein from bacteriophage originQuickGO ontologyBLASTP
14161871416555369putative single-stranded DNA binding protein of prophageQuickGO ontologyBLASTP
14168161417397582Superinfection exclusion protein BQuickGO ontologyBLASTP
14174141417806393putative regulatory protein NQuickGO ontologyBLASTP
14178081417981174hypothetical protein
14181651419064900hypothetical proteinBLASTP
14191941419901708repressor protein of bacteriophage originQuickGO ontologyBLASTP
14199801420207228regulatory protein from bacteriophage originQuickGO ontologyBLASTP
14203141420613300regulatory protein CII from phage originQuickGO ontologyBLASTP
1420555142063480OopQuickGO ontology
14206461421545900replication protein from bacteriophage originQuickGO ontologyBLASTP
14215421422243702putative replication protein P of bacteriophageQuickGO ontologyBLASTP
14222401422530291ren protein from phage originQuickGO ontologyBLASTP
14225861423044459recombination protein ninB from phage originQuickGO ontologyBLASTP
14229811423568588putative DNA N-6-adenine-methyltransferase from phage originQuickGO ontologyBLASTP
14237021424085384hypothetical proteinBLASTP
14242921424654363endodeoxyribonuclease RUSQuickGO ontologyBLASTP
14248621425254393putative antitermination protein Q-like protein DLP12 prophageQuickGO ontologyBLASTP
14254111425935525outer membrane lipoprotein BlcQuickGO ontologyBLASTP
14261281427087960hypothetical proteinBLASTP