Pre_GI: BLASTN Hits

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Query: NC_011751:1405381 Escherichia coli UMN026 chromosome, complete genome

Start: 1405381, End: 1427099, Length: 21719

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a woman with uncomplicated acute cystitis in 1999 in the USA. This strain is drug resistant. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009801:1296488*1296488132313526648Escherichia coli E24377A, complete genome010610BLASTN svgBLASTP svg
CU928160:1232510*1232510125609923590Escherichia coli IAI1 chromosome, complete genome010610BLASTN svgBLASTP svg
NC_010498:1995500*1995500202472729228Escherichia coli SMS-3-5, complete genome010600BLASTN svgBLASTP svg
CP002516:2786000*2786000281204426045Escherichia coli KO11, complete genome010570BLASTN svgBLASTP svg
CP002185:1298675*1298675132326124587Escherichia coli W, complete genome010570BLASTN svgBLASTP svg
AP010958:1339263*1339263136273323471Escherichia coli O103:H2 str. 12009 DNA, complete genome010530BLASTN svgBLASTP svg
CU928145:1300863*1300863132330622444Escherichia coli 55989 chromosome, complete genome010530BLASTN svgBLASTP svg
NC_011748:1300863*1300863132330622444Escherichia coli 55989, complete genome010530BLASTN svgBLASTP svg
NC_010473:1245284*1245284127191826635Escherichia coli str. K-12 substr. DH10B, complete genome010440BLASTN svgBLASTP svg
NC_010468:2699000*2699000272285223853Escherichia coli ATCC 8739, complete genome010440BLASTN svgBLASTP svg
NC_010658:1193225*1193225121671123487Shigella boydii CDC 3083-94, complete genome010370BLASTN svgBLASTP svg
NC_000913:1188999*1188999122144532447Escherichia coli K12, complete genome010350BLASTN svgBLASTP svg
AC_000091:1191353*1191353122209930747Escherichia coli W3110 DNA, complete genome010350BLASTN svgBLASTP svg
NC_008563:1175035*1175035119859923565Escherichia coli APEC O1, complete genome010230BLASTN svgBLASTP svg
NC_007946:1239278*1239278125938320106Escherichia coli UTI89, complete genome08338BLASTN svgBLASTP svg
NC_009800:1254409*1254409127914624738Escherichia coli HS, complete genome07937BLASTN svgBLASTP svg
NC_004431:14016811401681142114919469Escherichia coli CFT073, complete genome06516BLASTN svgBLASTP svg
NC_002655:13329611332961135150618546Escherichia coli O157:H7 EDL933, complete genome06464BLASTN svgBLASTP svg
AP010958:5361207*5361207538029819092Escherichia coli O103:H2 str. 12009 DNA, complete genome05412BLASTN svgBLASTP svg
NC_011751:643976*64397666569121716Escherichia coli UMN026 chromosome, complete genome05386BLASTN svgBLASTP svg
NC_009792:17399701739970176500625037Citrobacter koseri ATCC BAA-895, complete genome04944BLASTN svgBLASTP svg
NC_011740:27699612769961278959919639Escherichia fergusonii ATCC 35469, complete genome04238BLASTN svgBLASTP svg
NC_011748:82436782436784378119415Escherichia coli 55989, complete genome03957BLASTN svgBLASTP svg
CU928145:82436782436784378119415Escherichia coli 55989 chromosome, complete genome03957BLASTN svgBLASTP svg
NC_011740:18318451831845185021818374Escherichia fergusonii ATCC 35469, complete genome03406BLASTN svgBLASTP svg
NC_009800:16575501657550168574228193Escherichia coli HS, complete genome02976BLASTN svgBLASTP svg
NC_011740:20721732072173211413741965Escherichia fergusonii ATCC 35469, complete genome02359BLASTN svgBLASTP svg
NC_013716:12989321298932132714328212Citrobacter rodentium ICC168, complete genome01943BLASTN svgBLASTP svg
NC_010473:498252*49825252418825937Escherichia coli str. K-12 substr. DH10B, complete genome01586BLASTN svgBLASTP svg
NC_000913:558920*55892058509926180Escherichia coli K12, complete genome01586BLASTN svgBLASTP svg
AC_000091:55892055892058720428285Escherichia coli W3110 DNA, complete genome01586BLASTN svgBLASTP svg
NC_013850:3340882*3340882337329232411Klebsiella variicola At-22 chromosome, complete genome01548BLASTN svgBLASTP svg
NC_011080:1321268*1321268133914217875Salmonella enterica subsp. enterica serovar Newport str. SL254,01471BLASTN svgBLASTP svg
NC_011083:1323827*1323827134240718581Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,01471BLASTN svgBLASTP svg
NC_011149:1870931*1870931190072529795Salmonella enterica subsp. enterica serovar Agona str. SL483,01467BLASTN svgBLASTP svg
NC_003197:1320861*1320861134738426524Salmonella typhimurium LT2, complete genome01461BLASTN svgBLASTP svg
NC_014121:2514544*2514544255659942056Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete01328BLASTN svgBLASTP svg
NC_013282:1804909*1804909182709922191Cronobacter turicensis, complete genome01166BLASTN svgBLASTP svg
NC_009800:289000*28900031038921390Escherichia coli HS, complete genome01025BLASTN svgBLASTP svg
NC_002655:30194030194032759925660Escherichia coli O157:H7 EDL933, complete genome0991BLASTN svgBLASTP svg
NC_002695:30193930193932873026792Escherichia coli O157:H7 str. Sakai, complete genome0991BLASTN svgBLASTP svg
NC_015567:2125415*2125415214809922685Serratia sp. AS9 chromosome, complete genome0989BLASTN svgBLASTP svg
NC_015566:2125403*2125403214809922697Serratia sp. AS12 chromosome, complete genome0989BLASTN svgBLASTP svg
NC_020064:1962172*1962172199309930928Serratia marcescens FGI94, complete genome0987BLASTN svgBLASTP svg
NC_006905:368942*36894239327424333Salmonella enterica subsp. enterica serovar Choleraesuis str0924BLASTN svgBLASTP svg
NC_009832:2211154*2211154224619035037Serratia proteamaculans 568, complete genome0904BLASTN svgBLASTP svg
NC_008258:26980626980629518525380Shigella flexneri 5 str. 8401, complete genome0894BLASTN svgBLASTP svg
NC_006511:25015002501500252217820679Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC0884BLASTN svgBLASTP svg
NC_014562:983398*983398101509931702Pantoea vagans C9-1 chromosome, complete genome0835BLASTN svgBLASTP svg
NC_012912:2216749*2216749224082124073Dickeya zeae Ech1591, complete genome0825BLASTN svgBLASTP svg
NC_011083:374000*37400039609922100Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,0811BLASTN svgBLASTP svg
NC_007946:26254612625461264923523775Escherichia coli UTI89, complete genome0763BLASTN svgBLASTP svg
NC_015061:3147691*3147691317026522575Rahnella sp. Y9602 chromosome, complete genome0751BLASTN svgBLASTP svg
NC_014500:2589089*2589089260812419036Dickeya dadantii 3937 chromosome, complete genome2e-167597BLASTN svgBLASTP svg
NC_010694:2189652*2189652221918829537Erwinia tasmaniensis, complete genome7e-161575BLASTN svgBLASTP svg
NC_012880:2425330*2425330245003424705Dickeya dadantii Ech703, complete genome3e-160573BLASTN svgBLASTP svg
NC_010067:25297502529750259435464605Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-119438BLASTN svgBLASTP svg
AP010958:2911741*2911741294759935859Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-106394BLASTN svgBLASTP svg
NC_011751:14460731446073147872932657Escherichia coli UMN026 chromosome, complete genome3e-98367BLASTN svgBLASTP svg
NC_008253:12284851228485125292524441Escherichia coli 536, complete genome2e-84321BLASTN svgBLASTP svg
NC_008563:12178041217804124159923796Escherichia coli APEC O1, complete genome4e-82313BLASTN svgBLASTP svg
NC_007946:12805081280508130218721680Escherichia coli UTI89, complete genome4e-82313BLASTN svgBLASTP svg
NC_011750:19788011978801200896030160Escherichia coli IAI39 chromosome, complete genome4e-79303BLASTN svgBLASTP svg
NC_004431:14439681443968146977025803Escherichia coli CFT073, complete genome2e-65258BLASTN svgBLASTP svg
NC_008258:18738051873805189655222748Shigella flexneri 5 str. 8401, complete genome3e-64254BLASTN svgBLASTP svg
NC_007712:1791766*1791766181730825543Sodalis glossinidius str. 'morsitans', complete genome8e-56226BLASTN svgBLASTP svg
NC_020063:2565605*2565605259927233668Enterobacteriaceae bacterium strain FGI 57, complete genome4e-48200BLASTN svgBLASTP svg
NC_015663:47674434767443479659929157Enterobacter aerogenes KCTC 2190 chromosome, complete genome4e-45190BLASTN svgBLASTP svg
NC_021150:2906471*2906471292809921629Azotobacter vinelandii CA6, complete genome4e-42180BLASTN svgBLASTP svg
NC_012560:2906459*2906459292809921641Azotobacter vinelandii DJ, complete genome4e-42180BLASTN svgBLASTP svg
NC_015663:45221094522109454904226934Enterobacter aerogenes KCTC 2190 chromosome, complete genome6e-38167BLASTN svgBLASTP svg
NC_010102:17797071779707181158331877Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-34155BLASTN svgBLASTP svg
NC_006905:13424741342474137811135638Salmonella enterica subsp. enterica serovar Choleraesuis str2e-34155BLASTN svgBLASTP svg
NC_010995:2855595*2855595294415488560Cellvibrio japonicus Ueda107, complete genome9e-34153BLASTN svgBLASTP svg
NC_009778:29932182993218302409930882Enterobacter sakazakii ATCC BAA-894, complete genome6e-32147BLASTN svgBLASTP svg
NC_013282:18424121842412187000127590Cronobacter turicensis, complete genome3e-30141BLASTN svgBLASTP svg
NC_013282:12009931200993124927948287Cronobacter turicensis, complete genome8e-28133BLASTN svgBLASTP svg
NC_010554:10084441008444102773319290Proteus mirabilis HI4320, complete genome3e-24121BLASTN svgBLASTP svg
NC_003197:23274742327474236419536722Salmonella typhimurium LT2, complete genome8e-19103BLASTN svgBLASTP svg
NC_010102:683444*68344472210838665Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,8e-19103BLASTN svgBLASTP svg
NC_011083:23750612375061241289137831Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,8e-19103BLASTN svgBLASTP svg
NC_012779:21849272184927220656121635Edwardsiella ictaluri 93-146, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_015563:63576536357653638561927967Delftia sp. Cs1-4 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008767:27375927375929740423646Neisseria meningitidis FAM18, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_003295:26694802669480269721727738Ralstonia solanacearum GMI1000, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010658:1933605*1933605196015326549Shigella boydii CDC 3083-94, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007384:2933625*2933625295770924085Shigella sonnei Ss046, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003197:1471349*1471349150894537597Salmonella typhimurium LT2, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004631:13258171325817135139825582Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-0971.9BLASTN svgBLASTP svg
NC_006511:1506915*1506915154594239028Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-0971.9BLASTN svgBLASTP svg
NC_006905:15090931509093153636427272Salmonella enterica subsp. enterica serovar Choleraesuis str3e-0971.9BLASTN svgBLASTP svg
NC_008340:27722327722330180624584Alkalilimnicola ehrlichei MLHE-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010102:16165301616530165555739028Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,3e-0971.9BLASTN svgBLASTP svg
NC_011080:14707941470794150838537592Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-0971.9BLASTN svgBLASTP svg
NC_011083:14768941476894150250725614Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-0971.9BLASTN svgBLASTP svg
NC_008752:5213431*5213431523609922669Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012559:23532362353236237609922864Laribacter hongkongensis HLHK9, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008781:4178115*4178115422557447460Polaromonas naphthalenivorans CJ2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008820:22689002268900229243723538Prochlorococcus marinus str. MIT 9303, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013850:1887556*1887556193878551230Klebsiella variicola At-22 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015677:39657163965716398829822583Ramlibacter tataouinensis TTB310 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013850:21823372182337224909966763Klebsiella variicola At-22 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009648:1541699*1541699160010958411Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007712:12199571219957125505635100Sodalis glossinidius str. 'morsitans', complete genome3e-0661.9BLASTN svgBLASTP svg