Pre_GI Gene

Some Help

Host: NC_004545 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004545:499709 Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism is found in the aphid Baizongia pistaciae. Aphid endosymbiont. It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4997095008211113DNA polymerase III subunit gammaQuickGO ontologyBLASTP
501046501378333hypothetical protein YbaBQuickGO ontologyBLASTP
5015075033871881heat shock protein 90QuickGO ontologyBLASTP
503441504088648adenylate kinaseQuickGO ontologyBLASTP
50413450420774tRNA-ArgQuickGO ontology
504309505172864methylenetetrahydrofolate dehydrogenaseQuickGO ontologyBLASTP
5051905065991410cysteinyl-tRNA synthetaseQuickGO ontologyBLASTP
507002507268267hypothetical proteinBLASTP
507389507598210cold shock protein EQuickGO ontologyBLASTP
5078885080021155S ribosomal RNAQuickGO ontologyBLASTP
508105511028292423S ribosomal RNAQuickGO ontologyBLASTP
51118851126073tRNA-GluQuickGO ontology
511465512313849shikimate 5-dehydrogenaseQuickGO ontologyBLASTP
512306512866561hypothetical proteinBLASTP
513039513521483polypeptide deformylaseQuickGO ontologyBLASTP
513523514494972methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
51575851614739050S ribosomal protein L17QuickGO ontologyBLASTP
516199517194996DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
51722351784362130S ribosomal protein S4QuickGO ontologyBLASTP
51789251828139030S ribosomal protein S11QuickGO ontologyBLASTP
51830051865635730S ribosomal protein S13QuickGO ontologyBLASTP
51879951891511750S ribosomal protein L36QuickGO ontologyBLASTP
5189445202691326preprotein translocase SecYQuickGO ontologyBLASTP
52028252072544450S ribosomal protein L15QuickGO ontologyBLASTP
52073652091217750S ribosomal protein L30QuickGO ontologyBLASTP
52090952146655830S ribosomal protein S5QuickGO ontologyBLASTP
52143552180036650S ribosomal protein L18QuickGO ontologyBLASTP
52180252234154050S ribosomal protein L6QuickGO ontologyBLASTP
52235652274839330S ribosomal protein S8QuickGO ontologyBLASTP
52278552309030630S ribosomal protein S14QuickGO ontologyBLASTP
52311552365454050S ribosomal protein L5QuickGO ontologyBLASTP
523670523984315ribosomal protein L24QuickGO ontologyBLASTP
52399752436536950S ribosomal protein L14QuickGO ontologyBLASTP
52452152477825830S ribosomal protein S17QuickGO ontologyBLASTP
52477152496819850S ribosomal protein L29QuickGO ontologyBLASTP
52496852537841150S ribosomal protein L16QuickGO ontologyBLASTP
52539152609870830S ribosomal protein S3QuickGO ontologyBLASTP
52610452646336050S ribosomal protein L22QuickGO ontologyBLASTP
526490526768279S19 ribosomal proteinQuickGO ontologyBLASTP
52678852760982250S ribosomal protein L2QuickGO ontologyBLASTP
52765052795230350S ribosomal protein L23QuickGO ontologyBLASTP
52796452857260950S ribosomal protein L4QuickGO ontologyBLASTP
52857452921864550S ribosomal protein L3QuickGO ontologyBLASTP