Pre_GI Gene

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Host: NC_011083 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011083:654479 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6544796570912613outer membrane usher protein SfmDQuickGO ontologyBLASTP
6571066581131008mannose binding protein FimHQuickGO ontologyBLASTP
658123658641519major fimbrial subunitQuickGO ontologyBLASTP
658687659319633fimbriae Z proteinQuickGO ontologyBLASTP
659923660645723fimbriae Y proteinQuickGO ontologyBLASTP
660606660758153hypothetical proteinBLASTP
661137661733597fimbriae W proteinQuickGO ontologyBLASTP
661689661925237hypothetical proteinBLASTP
663019663177159hypothetical proteinBLASTP
6632346648741641putative inner membrane proteinQuickGO ontologyBLASTP
664867665793927bactoprenol glucosyl transferaseQuickGO ontologyBLASTP
665790666152363bactoprenol-linked glucose translocaseQuickGO ontologyBLASTP
66641466648673tRNA-OTHERQuickGO ontologyBLASTP
667449667637189cation efflux system protein CusAQuickGO ontologyBLASTP
667688668542855transcriptional regulator AraC family proteinQuickGO ontologyBLASTP
6687586700831326probable pyridine nucleotide-disulfide oxidoreductase YkgCQuickGO ontologyBLASTP
670240670476237hypothetical proteinBLASTP
670489671049561protein of unknown function superfamilyQuickGO ontologyBLASTP
6711286723031176heat shock protein DnaJ domain proteinQuickGO ontologyBLASTP
6726296740231395phenylalanine-specific permeaseQuickGO ontologyBLASTP
6740656753121248transporter small conductance mechanosensitive ion channelQuickGO ontologyBLASTP