Pre_GI Gene

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Host: NC_003198 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003198:598000 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5980066006182613outer membrane usher protein FimD precursorQuickGO ontologyBLASTP
6006336016401008FimH protein precursorQuickGO ontologyBLASTP
601650602168519fimbria-like protein FimF precursorQuickGO ontologyBLASTP
602214602846633probable transcriptional regulator FimXZ proteinQuickGO ontologyBLASTP
603450604172723fimbriae Y proteinQuickGO ontologyBLASTP
604191604502312hypothetical proteinBLASTP
604664605260597fimbriae w proteinQuickGO ontologyBLASTP
60551560559177tRNA-ArgQuickGO ontology
6067606084001641hypothetical proteinBLASTP
608393609319927bactoprenol glucosyl transferaseQuickGO ontologyBLASTP
609316609678363bactoprenol-linked glucose translocaseQuickGO ontologyBLASTP
610081610326246possible copper-binding proteinQuickGO ontologyBLASTP
610886611740855hypothetical araC-family transcriptional regulatorQuickGO ontologyBLASTP
6119566132811326pyridine nucleotide-disulfide oxidoreductaseQuickGO ontologyBLASTP
613438613674237hypothetical secreted proteinQuickGO ontologyBLASTP
613687614247561hypothetical proteinBLASTP
614326614766441hypothetical proteinBLASTP
614791615501711hypothetical proteinBLASTP
6158276172211395phenylalanine-specific permeaseQuickGO ontologyBLASTP
6172636185101248hypothetical proteinBLASTP