Pre_GI Gene

Some Help

Host: NC_006511 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006511:2251022 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
225102222521971176putative ATPase involved in DNA repairQuickGO ontologyBLASTP
22522762252836561hypothetical proteinBLASTP
22528492253085237hypothetical secreted proteinQuickGO ontologyBLASTP
225324222545671326pyridine nucleotide-disulfide oxidoreductaseQuickGO ontologyBLASTP
22547832255637855hypothetical araC-family transcriptional regulatorQuickGO ontologyBLASTP
22556182255899282putative inner membrane protoncation antiporterQuickGO ontologyBLASTP
22561982256443246possible copper-binding proteinQuickGO ontologyBLASTP
22568462257208363bactoprenol-linked glucose translocaseQuickGO ontologyBLASTP
22572052258131927bactoprenol glucosyltransferaseQuickGO ontologyBLASTP
22601502260368219putative transposaseQuickGO ontologyBLASTP
2260936226100974tRNA-ArgQuickGO ontology
22612642261860597fimbriae w proteinQuickGO ontologyBLASTP
22620252262333309hypothetical proteinBLASTP
22623522263074723fimbriae Y proteinQuickGO ontologyBLASTP
22636782264310633probable transcriptional regulator FimXZ proteinQuickGO ontologyBLASTP
22643562264874519fimbria-like protein FimF precursorQuickGO ontologyBLASTP
226488422658911008FimH protein precursorQuickGO ontologyBLASTP
226590622685182613outer membrane usher protein FimD precursorQuickGO ontologyBLASTP
22685492269241693fimbrial chaperone proteinQuickGO ontologyBLASTP
22692852269818534hypothetical proteinBLASTP
22698932270450558type-1 fimbrial protein a chain precursorQuickGO ontologyBLASTP
22709852271851867FolD bifunctional protein includes methylenetetrahydrofolate dehydrogenase methenyltetrahydrofolate cyclohydrolaseQuickGO ontologyBLASTP
22718532272065213hypothetical proteinBLASTP
22721932272741549hypothetical proteinBLASTP
227283222742171386cysteinyl-tRNA synthetaseQuickGO ontologyBLASTP