Pre_GI: BLASTN Hits

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Query: NC_010498:4656716 Escherichia coli SMS-3-5, complete genome

Start: 4656716, End: 4675190, Length: 18475

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008253:45419154541915456410622192Escherichia coli 536, complete genome021480BLASTN svgBLASTP svg
NC_004431:48676484867648489054022893Escherichia coli CFT073, complete genome020030BLASTN svgBLASTP svg
NC_008563:46560004656000467809922100Escherichia coli APEC O1, complete genome019480BLASTN svgBLASTP svg
NC_011751:47959284795928481882822901Escherichia coli UMN026 chromosome, complete genome016310BLASTN svgBLASTP svg
AC_000091:43131674313167433668223516Escherichia coli W3110 DNA, complete genome015050BLASTN svgBLASTP svg
CP002516:44312354431235445210920875Escherichia coli KO11, complete genome015050BLASTN svgBLASTP svg
NC_000913:43074714307471432826120791Escherichia coli K12, complete genome015050BLASTN svgBLASTP svg
NC_010473:44094924409492443038920898Escherichia coli str. K-12 substr. DH10B, complete genome015050BLASTN svgBLASTP svg
NC_010468:43051054305105432709121987Escherichia coli ATCC 8739, complete genome014970BLASTN svgBLASTP svg
AP010958:50221965022196504082118626Escherichia coli O103:H2 str. 12009 DNA, complete genome014960BLASTN svgBLASTP svg
NC_007613:41568414156841418149124651Shigella boydii Sb227, complete genome014790BLASTN svgBLASTP svg
NC_002695:51648195164819518468719869Escherichia coli O157:H7 str. Sakai, complete genome014750BLASTN svgBLASTP svg
NC_002655:51948045194804521379718994Escherichia coli O157:H7 EDL933, complete genome014740BLASTN svgBLASTP svg
NC_009801:46430004643000466340420405Escherichia coli E24377A, complete genome014680BLASTN svgBLASTP svg
CU928160:43951564395156441536720212Escherichia coli IAI1 chromosome, complete genome014660BLASTN svgBLASTP svg
NC_007384:45300004530000455031620317Shigella sonnei Ss046, complete genome014640BLASTN svgBLASTP svg
NC_009800:43322294332229435609923871Escherichia coli HS, complete genome014620BLASTN svgBLASTP svg
CP002185:45661504566150459009923950Escherichia coli W, complete genome014610BLASTN svgBLASTP svg
NC_011750:47194774719477473972720251Escherichia coli IAI39 chromosome, complete genome012280BLASTN svgBLASTP svg
CU928145:46959324695932471752121590Escherichia coli 55989 chromosome, complete genome011550BLASTN svgBLASTP svg
NC_011748:46959324695932471752121590Escherichia coli 55989, complete genome011550BLASTN svgBLASTP svg
NC_007606:38427083842708386376421057Shigella dysenteriae Sd197, complete genome010920BLASTN svgBLASTP svg
NC_020064:41255004125500414419318694Serratia marcescens FGI94, complete genome5e-41176BLASTN svgBLASTP svg
NC_010694:63654*636548609922446Erwinia tasmaniensis, complete genome5e-32147BLASTN svgBLASTP svg
NC_014562:19350881935088195391418827Pantoea vagans C9-1 chromosome, complete genome2e-31145BLASTN svgBLASTP svg
NC_008786:32917003291700331510623407Verminephrobacter eiseniae EF01-2, complete genome1e-23119BLASTN svgBLASTP svg
NC_007712:31630003163000318759924600Sodalis glossinidius str. 'morsitans', complete genome2e-22115BLASTN svgBLASTP svg
NC_014118:13311641331164135459923436Burkholderia sp. CCGE1002 chromosome chromosome 2, complete3e-21111BLASTN svgBLASTP svg
NC_013961:73037*7303710749134455Erwinia amylovora, complete genome4e-20107BLASTN svgBLASTP svg
NC_012779:2755338*2755338278000524668Edwardsiella ictaluri 93-146, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013592:1056500*1056500108285526356Dickeya dadantii Ech586, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012880:3421500*3421500345764636147Dickeya dadantii Ech703, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012856:112296322963Ralstonia pickettii 12D chromosome 1, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_010473:3354052*3354052337759923548Escherichia coli str. K-12 substr. DH10B, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_007384:10860251086025111635930335Shigella sonnei Ss046, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012691:21464732146473217078724315Tolumonas auensis DSM 9187, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014121:32359113235911326030624396Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_007946:3855445*3855445387497119527Escherichia coli UTI89, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007613:34703143470314350909338780Shigella boydii Sb227, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_004741:41320564132056415578223727Shigella flexneri 2a str. 2457T, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_004337:36219853621985364626824284Shigella flexneri 2a str. 301, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_000913:3624826*3624826366560340778Escherichia coli K12, complete genome1e-0765.9BLASTN svgBLASTP svg
CU928160:37090813709081373009921019Escherichia coli IAI1 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
CU928145:39834323983432403268849257Escherichia coli 55989 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
CP002516:24676724676726745320687Escherichia coli KO11, complete genome1e-0765.9BLASTN svgBLASTP svg
CP002185:38224703822470385930636837Escherichia coli W, complete genome1e-0765.9BLASTN svgBLASTP svg
AP010958:43134624313462433479021329Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-0765.9BLASTN svgBLASTP svg
AC_000091:39768883976888399503018143Escherichia coli W3110 DNA, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_008258:35815833581583360816926587Shigella flexneri 5 str. 8401, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_008563:3888232*3888232390776619535Escherichia coli APEC O1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015733:3923800*3923800394679722998Pseudomonas putida S16 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014841:13130813130815514123834Pantoea sp. At-9b plasmid pPAT9B04, complete sequence1e-0765.9BLASTN svgBLASTP svg
NC_014151:10337361033736105609922364Cellulomonas flavigena DSM 20109 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012997:59407594078341424008Teredinibacter turnerae T7901, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012917:569856*56985658778417929Pectobacterium carotovorum subsp. carotovorum PC1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_011748:39834323983432403268849257Escherichia coli 55989, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010995:3745957*3745957379018344227Cellvibrio japonicus Ueda107, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010473:37225713722571375929536725Escherichia coli str. K-12 substr. DH10B, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010468:23100023100025334622347Escherichia coli ATCC 8739, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_009801:39569173956917397533818422Escherichia coli E24377A, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_009800:3685651*3685651370909923449Escherichia coli HS, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_008786:13320411332041135577823738Verminephrobacter eiseniae EF01-2, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007384:27881027881029760818799Shigella sonnei Ss046, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_019973:1731626*1731626176479533170Mesorhizobium australicum WSM2073, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_020181:1653261*1653261168347330213Enterobacter aerogenes EA1509E, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_007384:16500*165004120424705Shigella sonnei Ss046, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007946:25874725874728282624080Escherichia coli UTI89, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008253:25705925705928215125093Escherichia coli 536, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008563:258725*25872528280524081Escherichia coli APEC O1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008570:30132633013263304329130029Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008786:39150003915000394226927270Verminephrobacter eiseniae EF01-2, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009801:11921*119213399422074Escherichia coli E24377A, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010468:3970995*3970995399406323069Escherichia coli ATCC 8739, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_016048:1930089*1930089196890738819Oscillibacter valericigenes Sjm18-20, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012912:41674294167429418510117673Dickeya zeae Ech1591, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_011751:25683025683028052023691Escherichia coli UMN026 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_011750:35840003584000361674032741Escherichia coli IAI39 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_011740:14947961494796152042525630Escherichia fergusonii ATCC 35469, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010658:4494103*4494103451209917997Shigella boydii CDC 3083-94, complete genome2e-0661.9BLASTN svgBLASTP svg
AC_000091:39952333995233402122325991Escherichia coli W3110 DNA, complete genome9e-0660BLASTN svgBLASTP svg
AP010958:86786986786989060722739Escherichia coli O103:H2 str. 12009 DNA, complete genome9e-0660BLASTN svgBLASTP svg
NC_000913:27207127207130179729727Escherichia coli K12, complete genome9e-0660BLASTN svgBLASTP svg
NC_002695:20565452056545207693920395Escherichia coli O157:H7 str. Sakai, complete genome9e-0660BLASTN svgBLASTP svg
NC_007384:38970003897000391653419535Shigella sonnei Ss046, complete genome9e-0660BLASTN svgBLASTP svg
NC_007613:29818292981829300438522557Shigella boydii Sb227, complete genome9e-0660BLASTN svgBLASTP svg
NC_008258:1934479*1934479196306928591Shigella flexneri 5 str. 8401, complete genome9e-0660BLASTN svgBLASTP svg
NC_008544:81873081873084078622057Burkholderia cenocepacia HI2424 chromosome 3, complete sequence9e-0660BLASTN svgBLASTP svg
NC_010473:24742924742927209924671Escherichia coli str. K-12 substr. DH10B, complete genome9e-0660BLASTN svgBLASTP svg
NC_013416:668152*66815269868530534Aggregatibacter actinomycetemcomitans D11S-1, complete genome9e-0660BLASTN svgBLASTP svg
NC_014019:32135993213599323332419726Bacillus megaterium QM B1551 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_015976:2900891*2900891292514524255Sphingobium sp. SYK-6, complete genome9e-0660BLASTN svgBLASTP svg
NC_019673:1039258*1039258106559926342Saccharothrix espanaensis DSM 44229 complete genome9e-0660BLASTN svgBLASTP svg
AC_000091:27332527332530179728473Escherichia coli W3110 DNA, complete genome9e-0660BLASTN svgBLASTP svg