Pre_GI Gene

Some Help

Host: NC_010473 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010473:247429 Escherichia coli str. K-12 substr. DH10B, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2474292484451017CP4-6 prophage IS5 transposase and trans-activatorQuickGO ontologyBLASTP
2486532500561404CP4-6 prophage predicted S-methylmethionine transporterQuickGO ontologyBLASTP
250043250975933CP4-6 prophage S-methylmethioninehomocysteine methyltransferaseQuickGO ontologyBLASTP
2510842521301047CP4-6 prophage predicted ferric transporter subunit ATP-binding component of ABC superfamilyQuickGO ontologyBLASTP
252142252504363CP4-6 prophage predicted ferric trasnporter subunit membrane component of ABC superfamilyQuickGO ontologyBLASTP
252506253009504CP4-6 prophage IS1 transposase InsABQuickGO ontologyBLASTP
252928253203276CP4-6 prophage IS1 repressor protein InsAQuickGO ontologyBLASTP
253352253690339predicted IS proteinQuickGO ontologyBLASTP
253713254063351CP4-6 prophage conserved proteinQuickGO ontologyBLASTP
2541572553111155CP4-6 prophage predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
255585256514930CP4-6 prophage predicted lyasesynthaseQuickGO ontologyBLASTP
2565292584961968CP4-6 prophage predicted dehydrataseQuickGO ontologyBLASTP
2587232601051383CP4-6 prophage predicted sugar transporterQuickGO ontologyBLASTP
2601172617271611CP4-6 prophage predicted xylosidasearabinosidaseQuickGO ontologyBLASTP
2640752650791005CP4-6 prophage ornithine carbamoyltransferase 2 chain FQuickGO ontologyBLASTP
265423265926504CP4-6 prophage IS1 transposase InsABQuickGO ontologyBLASTP
265845266120276CP4-6 prophage IS1 repressor protein InsAQuickGO ontologyBLASTP
266274267005732CP4-6 prophage predicted proteinQuickGO ontologyBLASTP
267096267722627CP4-6 prophage conserved proteinQuickGO ontologyBLASTP
267994268692699CP4-6 prophage DNA-binding proteinQuickGO ontologyBLASTP
268719269573855CP4-6 prophage predicted proteinQuickGO ontologyBLASTP
269913270353441CP4-6 prophage predicted proteinQuickGO ontologyBLASTP
2704702718701401CP4-6 prophage predicted phage integraseQuickGO ontologyBLASTP