Pre_GI Gene

Some Help

Host: NC_009800 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009800:4332229 Escherichia coli HS, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
433076643322321467RND efflux system outer membrane lipoprotein NodT familyQuickGO ontologyBLASTP
433222943342802052multidrug resistance protein MdtOQuickGO ontologyBLASTP
433428043353111032multidrug resistance protein MdtNQuickGO ontologyBLASTP
43353304335653324hypothetical proteinBLASTP
433581443377991986metallo-beta-lactamase superfamily proteinQuickGO ontologyBLASTP
43379934338160168hypothetical proteinBLASTP
43381334338369237ribose-5-phosphate isomerase B truncationQuickGO ontologyBLASTP
43384624338788327hypothetical proteinBLASTP
43389144339672759phosphonate utilization proteinQuickGO ontologyBLASTP
43396744340108435acetyltransferase GNAT familyQuickGO ontologyBLASTP
43400954340652558phosphonate metabolism protein15-bisphosphokinase PRPP-forming PhnNQuickGO ontologyBLASTP
434065243417881137phosphonate metabolism protein PhnMQuickGO ontologyBLASTP
43417854342465681phosphonate C-P lyase system protein PhnLQuickGO ontologyBLASTP
43425764343334759phosphonate C-P lyase system protein PhnKQuickGO ontologyBLASTP
43433314344176846phosphonate metabolism protein PhnJQuickGO ontologyBLASTP
434416943452331065phosphonate metabolism protein PhnIQuickGO ontologyBLASTP
43452334345817585bacterial phosphonate metabolism protein PhnHQuickGO ontologyBLASTP
43458144346266453phosphonate C-P lyase system protein PhnGQuickGO ontologyBLASTP
43462674346992726phosphonates metabolism transcriptional regulator PhnFQuickGO ontologyBLASTP
43470134347792780phosphonate ABC transporter permease proteinQuickGO ontologyBLASTP
434785443488701017phosphonate ABC transporter periplasmic phosphonate-binding proteinQuickGO ontologyBLASTP
43488954349683789phosphonate ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
43498164350259444putative phnB proteinQuickGO ontologyBLASTP
43504194350754336alkylphosphonate utilization operon protein PhnAQuickGO ontologyBLASTP
435115643533842229hypothetical proteinBLASTP
43534144354259846hypothetical proteinBLASTP
435452343560251503prolinebetaine transporterQuickGO ontologyBLASTP