Pre_GI Gene

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Host: NC_008544 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008544:818730 Burkholderia cenocepacia HI2424 chromosome 3, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8187308199141185porin Gram-negative typeQuickGO ontologyBLASTP
820406820750345hypothetical proteinBLASTP
820796821785990ABC nitratesulfonatebicarbonate transporter periplasmic ligand binding proteinQuickGO ontologyBLASTP
821842822684843hypothetical proteinBLASTP
8231178248141698Propeptide peptidase M4 and M36QuickGO ontologyBLASTP
826049826807759GntR domain proteinQuickGO ontologyBLASTP
8269288278098825-carboxymethyl-2-hydroxymuconate delta-isomeraseQuickGO ontologyBLASTP
827806828591786alphabeta hydrolase foldQuickGO ontologyBLASTP
8286158298861272amidohydrolaseQuickGO ontologyBLASTP
830071830853783hypothetical proteinBLASTP
8313328330111680phage integrase family proteinQuickGO ontologyBLASTP
8330088359892982transposase Tn3 family proteinQuickGO ontologyBLASTP
836722837378657transcriptional regulator GntR familyQuickGO ontologyBLASTP
8373698386281260acetylornithine deacetylase or succinyl-diaminopimelate desuccinylaseQuickGO ontologyBLASTP
838714839451738ABC transporter relatedQuickGO ontologyBLASTP
839429840118690polar amino acid ABC transporter inner membrane subunitQuickGO ontologyBLASTP
840118840786669polar amino acid ABC transporter inner membrane subunitQuickGO ontologyBLASTP