Pre_GI: BLASTP Hits

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Query: NC_011094:688626:701942 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 701942, End: 702157, Length: 216

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:588895:601865601865602080216Salmonella enterica subsp. enterica serovar Agona str. SL483,cation efflux system protein CusA2e-29127
NC_015663:2090442:2118124211812421212733150Enterobacter aerogenes KCTC 2190 chromosome, complete genomecation efflux system protein CusA3e-29127
NC_009778:4188000:4206746420674642098923147Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-29125
NC_010102:2495441:249885324988532499287435Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-24109
NC_011083:654479:667449667449667637189Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,cation efflux system protein CusA1e-23108
NC_011205:645591:664013664013664201189Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cation efflux system protein CusA1e-23108
NC_003197:606048:618968618968619207240Salmonella typhimurium LT2, complete genome8e-24108
NC_011274:603901:616798616798617034237Salmonella enterica subsp. enterica serovar Gallinarum str. 287/918e-24108
NC_011080:610428:623427623427623684258Salmonella enterica subsp. enterica serovar Newport str. SL254,cation efflux system protein CusA8e-24108
NC_016810:604813:618456618456618692237Salmonella enterica subsp. enterica serovar Typhimurium str2e-23107
NC_011294:585500:598426598426598662237Salmonella enterica subsp. enterica serovar Enteritidis str2e-23107
NC_011274:603901:616798616798617034237Salmonella enterica subsp. enterica serovar Gallinarum str. 287/912e-23107
NC_009138:1544835:1544835154483515478072973Herminiimonas arsenicoxydans, complete genomeouter membrane copper (silver) and drug transport protein (RND family)1e-22105
NC_010170:4800000:4834829483482948379963168Bordetella petrii, complete genomeAcrB/AcrD/AcrF family protein1e-22105
NC_015733:5909821:5950852595085259540103159Pseudomonas putida S16 chromosome, complete genomeCzcA family heavy metal efflux protein1e-22104
NC_009659:1923925:1945984194598419491363153Janthinobacterium sp. Marseille chromosome, complete genomesilver efflux pump1e-22104
NC_009659:1050532:1054388105438810575403153Janthinobacterium sp. Marseille chromosome, complete genomeCzcA family heavy metal efflux protein1e-22104
NC_009512:27783:2462824628277863159Pseudomonas putida F1, complete genomeheavy metal efflux pump, CzcA family5e-22103
NC_016831:2402893:240573224057322405911180Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-22103
NC_016857:604792:618516618516618695180Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transport protein4e-22103
NC_016863:606742:619721619721619900180Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transport protein4e-22103
NC_017046:604789:618513618513618692180Salmonella enterica subsp. enterica serovar Typhimurium str. 7984e-22103
NC_018080:3088866:3116717311671731198663150Pseudomonas aeruginosa DK2 chromosome, complete genomeCzcA family heavy metal efflux protein3e-22103
NC_009138:519965:5362255362255392873063Herminiimonas arsenicoxydans, complete genomeouter membrane copper (silver) and drug transport protein (RND family) 43e-22103
NC_002947:6123608:6140255614025561434133159Pseudomonas putida KT2440, complete genomeheavy metal RND efflux transporter, CzcA family7e-22102
NC_009439:2427120:2445697244569724488463150Pseudomonas mendocina ymp, complete genomeCzcA family heavy metal efflux protein8e-22102
NC_008782:1308007:1308007130800713111263120Acidovorax sp. JS42, complete genomeheavy metal efflux pump, CzcA family1e-21101
NC_015726:2177783:2177783217778321809533171Cupriavidus necator N-1 chromosome 1, complete sequencecobalt-zinc-cadmium resistance efflux pump CzcB2e-21100
NC_008800:3955284:3956810395681039599413132Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative cation efflux system protein2e-2097.4
NC_015224:3820338:383778238377823838216435Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Heavy metal efflux pump, CzcA family5e-2096.3
NC_012968:1594954:1628234162823416313593126Methylotenera mobilis JLW8, complete genomeheavy metal efflux pump, CzcA family5e-2096.3
NC_010087:376918:3927223927223959283207Burkholderia multivorans ATCC 17616 chromosome 3, completeheavy metal efflux pump, CzcA family1e-1995.1
NC_016860:644095:657090657090657254165Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-1994
NC_016856:606742:619737619737619901165Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-1994
NC_013446:2820000:2853720285372028568903171Comamonas testosteroni CNB-2, complete genomeheavy metal efflux pump, CzcA family3e-1994
NC_003198:598000:610695610695610835141Salmonella enterica subsp. enterica serovar Typhi str. CT18,7e-1889.4
NC_004631:2366335:237026623702662370406141Salmonella enterica subsp. enterica serovar Typhi Ty2, complete7e-1889.4
NC_015422:2858228:2868832286883228720113180Alicycliphilus denitrificans K601 chromosome, complete genomeCzcA family heavy metal efflux pump1e-1788.2
NC_008782:2857899:2866988286698828701673180Acidovorax sp. JS42, complete genomeheavy metal efflux pump, CzcA family1e-1788.2
NC_015422:3513689:3524618352461835277493132Alicycliphilus denitrificans K601 chromosome, complete genomeCzcA family heavy metal efflux pump2e-1787.8
NC_011992:2279752:2320634232063423237653132Acidovorax ebreus TPSY, complete genomeheavy metal efflux pump, CzcA family2e-1787.8
NC_008782:1510000:1537816153781615409473132Acidovorax sp. JS42, complete genomeheavy metal efflux pump, CzcA family5e-1786.3
NC_016616:1091606:1107711110771111108453135Dechlorosoma suillum PS chromosome, complete genomeheavy metal efflux pump8e-1785.9
NC_016616:2768053:2785081278508127882153135Dechlorosoma suillum PS chromosome, complete genomeheavy metal efflux pump1e-1685.5
NC_008347:174000:1874661874661906363171Maricaulis maris MCS10, complete genomeputative cation efflux system transmembrane protein1e-1685.1
NC_015740:2692023:2692023269202326951333111Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeheavy metal efflux pump CzcA2e-1684.7
NC_009434:3611738:3637032363703236401543123Pseudomonas stutzeri A1501, complete genomeheavy metal efflux pump CzcA2e-1684.3
NC_009832:3703202:3720707372070737238263120Serratia proteamaculans 568, complete genomeheavy metal efflux pump, CzcA family2e-1684.3
NC_014394:738365:7562907562907594003111Gallionella capsiferriformans ES-2 chromosome, complete genomeheavy metal efflux pump, CzcA family3e-1683.6
NC_009720:5079048:5075884507588450790513168Xanthobacter autotrophicus Py2, complete genomeCzcA family heavy metal efflux protein8e-1682.4
NC_014836:33278:3596335963390913129Desulfurispirillum indicum S5 chromosome, complete genomeheavy metal efflux pump, CzcA family1e-1581.6
NC_012988:1162838:1162838116283811660113174Methylobacterium extorquens DM4, complete genomeouter membrane copper/drug transport protein3e-1580.5
NC_011757:1121262:1122512112251211256853174Methylobacterium chloromethanicum CM4, complete genomeheavy metal efflux pump, CzcA family3e-1580.5
NC_016832:2363136:236706723670672367192126Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Cation efflux system protein cusA8e-1579
NC_016602:173314:1912011912011943203120Vibrio furnissii NCTC 11218 chromosome 1, complete sequencecation efflux system transmembrane protein4e-1476.6
NC_017371:1358000:1379438137943813825453108Helicobacter pylori Gambia94/24 chromosome, complete genomeputative heavy metal efflux pump CzcA6e-1476.3
NC_017376:1324000:1345253134525313483663114Helicobacter pylori SNT49 chromosome, complete genomecopper efflux system membrane protein CusA7e-1475.9
NC_017361:1303553:1325980132598013290783099Helicobacter pylori SouthAfrica7 chromosome, complete genomecation efflux system protein8e-1475.9
NC_017367:1333811:1355963135596313590763114Helicobacter pylori F57, complete genomecation efflux system protein8e-1475.9
NC_011498:1345623:1367874136787413709813108Helicobacter pylori P12, complete genomecobalt-zinc-cadmium resistance protein8e-1475.9
NC_017372:1373766:1395619139561913987263108Helicobacter pylori India7 chromosome, complete genomecation efflux system protein (czcA)1e-1375.5
NC_020126:6264651:6267539626753962708413303Myxococcus stipitatus DSM 14675, complete genomecation efflux system protein CusA9e-1475.5
NC_017355:1299874:1322095132209513252083114Helicobacter pylori v225d chromosome, complete genomeCzcA family heavy metal efflux pump9e-1475.5
NC_014560:1309470:1331773133177313348803108Helicobacter pylori SJM180 chromosome, complete genomeputative heavy metal efflux pump CzcA8e-1475.5
NC_017358:1342000:1363081136308113662033123Helicobacter pylori Cuz20 chromosome, complete genomecation efflux system protein (czcA)8e-1475.5
NC_017368:1300000:1321295132129513244083114Helicobacter pylori F16, complete genomecation efflux system protein1e-1375.1
NC_011761:2131911:2172992217299221761053114Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeCzcA family heavy metal efflux pump1e-1374.7
NC_011206:2040000:2061034206103420641443111Acidithiobacillus ferrooxidans ATCC 53993, complete genomeheavy metal efflux pump, CzcA family2e-1374.7
NC_007520:1940120:1940120194012019432843165Thiomicrospira crunogena XCL-2, complete genomeHeavy metal efflux pump CzcA2e-1374.7
NC_008607:11663:2463624636277733138Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequenceheavy metal efflux pump, CzcA family5e-1269.7
NC_018697:1343756:1354347135434713575533207Cycloclasticus sp. P1 chromosome, complete genomeHeavy metal efflux pump6e-1269.3
NC_012982:711122:7345547345547377633210Hirschia baltica ATCC 49814, complete genomeheavy metal efflux pump, CzcA family3e-1167
NC_011147:2247460:225080222508022251011210Salmonella enterica subsp. enterica serovar Paratyphi A str5e-1166.6
NC_006511:2251022:225561822556182255899282Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative inner membrane proton/cation antiporter6e-1166.2
NC_007484:1671835:1694738169473816979413204Nitrosococcus oceani ATCC 19707, complete genomeHeavy metal efflux pump7e-1165.9
NC_007484:1694738:1694738169473816979413204Nitrosococcus oceani ATCC 19707, complete genomeHeavy metal efflux pump7e-1165.9
NC_010831:931961:9319619319619352303270Chlorobium phaeobacteroides BS1, complete genomeheavy metal efflux pump, CzcA family8e-1165.9
NC_014315:1744485:1765441176544117686443204Nitrosococcus watsoni C-113 chromosome, complete genomeCzcA family heavy metal efflux pump9e-1165.5
NC_007484:1694738:1702681170268117059053225Nitrosococcus oceani ATCC 19707, complete genomeHeavy metal efflux pump2e-1064.3
NC_002942:1109618:1114601111460111177443144Legionella pneumophila subsp. pneumophila str. Philadelphia 1,chemiosmotic efflux system B protein A3e-1063.9
NC_006368:2684358:2704471270447127076143144Legionella pneumophila str. Paris, complete genomeChemiosmotic efflux system B protein A4e-1063.5
NC_014315:1744485:1753627175362717568483222Nitrosococcus watsoni C-113 chromosome, complete genomeCzcA family heavy metal efflux pump8e-1062.4
NC_013960:1693643:1699559169955917028733315Nitrosococcus halophilus Nc4 chromosome, complete genomeheavy metal efflux pump, CzcA family2e-0858.2
NC_020156:737063:7773277773277817214395Nonlabens dokdonensis DSW-6, complete genomecation efflux system protein, AcrB/AcrD/AcrF family protein2e-0857.8
NC_012483:1408500:1417384141738414205513168Acidobacterium capsulatum ATCC 51196, complete genomeheavy metal efflux RND transporter CusA7e-0855.8
NC_017506:93494:1138681138681169753108Marinobacter adhaerens HP15 chromosome, complete genomeCzcA family heavy metal efflux pump9e-0855.5
NC_013730:1074393:1090538109053810936693132Spirosoma linguale DSM 74, complete genomeheavy metal efflux pump, CzcA family3e-0753.9
NC_017187:422698:4414014414014444273027Arcobacter butzleri ED-1, complete genomeouter membrane component of efflux system3e-0753.9
NC_018679:278250:2794472794472825543108Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeputative RND efflux system protein4e-0753.1
NC_004461:1849176:1875831187583118789863156Staphylococcus epidermidis ATCC 12228, complete genomeacriflavin resistance protein5e-0753.1
NC_002976:1844901:1870861187086118740163156Staphylococcus epidermidis RP62A, complete genomeAcrB/AcrD/AcrF family protein5e-0753.1
NC_008347:2515921:2546820254682025499603141Maricaulis maris MCS10, complete genomeheavy metal efflux pump, CzcA family7e-0752.8
NC_002942:1109618:1127825112782511310403216Legionella pneumophila subsp. pneumophila str. Philadelphia 1,chemiosmotic efflux system protein A-like protein7e-0752.8
NC_010814:155834:1558341558341589323099Geobacter lovleyi SZ, complete genomeacriflavin resistance protein1e-0652.4
NC_016941:2234937:2262281226228122654483168Staphylococcus aureus subsp. aureus MSHR1132, complete genomeAcrB/AcrD/AcrF family protein1e-0652
NC_014041:3633842:3649507364950736532473741Zunongwangia profunda SM-A87 chromosome, complete genomeputative copper/silver resistance-related transport membrane protein1e-0652
NC_015638:328601:3451873451873489333747Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeacriflavin resistance protein1e-0652
NC_007622:2239799:2267776226777622709433168Staphylococcus aureus RF122, complete genomeacriflavin resistance transport protein2e-0651.6
NC_002953:2282236:2308158230815823113253168Staphylococcus aureus subsp. aureus MSSA476, complete genomeAcrB/AcrD/AcrF family protein2e-0651.6
NC_002952:2390668:2416600241660024197673168Staphylococcus aureus subsp. aureus MRSA252, complete genomeAcrB/AcrD/AcrF family protein2e-0651.6
NC_009487:2390713:2417667241766724208343168Staphylococcus aureus subsp. aureus JH9 chromosome, completeacriflavin resistance protein2e-0651.6
NC_009632:2391397:2417543241754324207103168Staphylococcus aureus subsp. aureus JH1 chromosome, completeacriflavin resistance protein2e-0651.6
NC_016928:2249907:2277447227744722806143168Staphylococcus aureus subsp. aureus M013 chromosome, completeRND multidrug efflux transporter, Acriflavinresistance protein2e-0651.6
NC_017338:2296906:2323640232364023268043165Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeRND superfamily resistance-nodulation-cell division acriflavin:proton (H+) antiporter2e-0651.6
NC_015144:47783:5919759197635554359Weeksella virosa DSM 16922 chromosome, complete genomeheavy metal efflux pump, CzcA family1e-0651.6
NC_018697:1343756:1388242138824213913643123Cycloclasticus sp. P1 chromosome, complete genomeCobalt/zinc/cadmium efflux RND transporter,permease protein1e-0651.6
NC_018515:3108755:3127112312711231301953084Desulfosporosinus meridiei DSM 13257 chromosome, complete genomecation/multidrug efflux pump1e-0651.6
NC_013222:299683:3277993277993315663768Robiginitalea biformata HTCC2501, complete genomeputative copper/silver resistance-related transport membrane protein1e-0651.6
NC_015177:124000:1339441339441382604317Pedobacter saltans DSM 12145 chromosome, complete genomeheavy metal efflux pump, CzcA family2e-0651.6
NC_008571:1374496:1376449137644913801893741Gramella forsetii KT0803, complete genomeAcrB/AcrD/AcrF family membrane transport protein3e-0650.8
NC_013730:4857090:4877409487740948805223114Spirosoma linguale DSM 74, complete genomeheavy metal efflux pump, CzcA family3e-0650.4
NC_012225:2611680:2615238261523826183753138Brachyspira hyodysenteriae WA1, complete genomeputative acriflavin resistance protein4e-0650.1
NC_015914:3197772:3219662321966232234863825Cyclobacterium marinum DSM 745 chromosome, complete genomeacriflavin resistance protein4e-0650.1
NC_017243:2672909:2693626269362626967633138Brachyspira intermedia PWS/A chromosome, complete genomeacriflavin resistance protein4e-0650.1
NC_012721:137046:1370461370461401323087Burkholderia glumae BGR1 chromosome 2, complete genomeAcriflavin resistance protein4e-0650.1
NC_011992:3752867:3768186376818637713143129Acidovorax ebreus TPSY, complete genomeheavy metal efflux pump, CzcA family6e-0649.7
NC_017506:93494:1228251228251260223198Marinobacter adhaerens HP15 chromosome, complete genomeCzcA family heavy metal efflux pump6e-0649.7
NC_002939:3043068:3060587306058730636973111Geobacter sulfurreducens PCA, complete genomeAcrB/AcrD/AcrF family protein8e-0649.3
NC_012913:2189862:2209369220936922124673099Aggregatibacter aphrophilus NJ8700, complete genomeacriflavine resistance protein8e-0649.3
NC_012483:1841000:1864039186403918671793141Acidobacterium capsulatum ATCC 51196, complete genomeheavy metal efflux pump, CzcA family7e-0649.3
NC_016599:513357:5161255161255199373813Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeputative silver efflux pump6e-0649.3
NC_011138:105196:1051961051961082253030Alteromonas macleodii 'Deep ecotype', complete genomecation efflux system protein CzcA9e-0648.9
NC_020291:4305521:4327420432742043305633144Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomecation/multidrug efflux pump9e-0648.9
NC_010943:2465976:2482669248266924858723204Stenotrophomonas maltophilia K279a, complete genomeputative Cobalt-zinc-cadmium resistance protein1e-0548.9