Pre_GI Gene

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Host: NC_002947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002947:6123608 Pseudomonas putida KT2440, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
612360861247981191Rieske 2Fe-2S family proteinQuickGO ontologyBLASTP
612519661268991704cholinecarnitinebetaine transporter family proteinQuickGO ontologyBLASTP
61269666127874909transcriptional regulator LysR familyQuickGO ontologyBLASTP
61287966129128333hypothetical proteinBLASTP
61291956129650456hypothetical proteinBLASTP
61296406130422783cytochrome c family proteinQuickGO ontologyBLASTP
613043261315411110copper resistance protein BQuickGO ontologyBLASTP
613183361338422010copper resistance protein AQuickGO ontologyBLASTP
61340386134292255hypothetical protein
61344246134783360hypothetical proteinBLASTP
61349766135653678transcriptional activator CopRQuickGO ontologyBLASTP
613565061370591410sensor protein CopSQuickGO ontologyBLASTP
613753661387891254heavy metal RND efflux outer membrane protein CzcC familyQuickGO ontologyBLASTP
613878661402581473heavy metal RND efflux membrane fusion protein CzcB familyQuickGO ontologyBLASTP
614025561434133159heavy metal RND efflux transporter CzcA familyQuickGO ontologyBLASTP
61434106143751342hypothetical proteinBLASTP