Pre_GI Gene

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Host: NC_011147 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011147:2247460 Salmonella enterica subsp. enterica serovar Paratyphi A str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22474602248020561hypothetical proteinBLASTP
22480332248269237hypothetical proteinBLASTP
224842622497511326pyridine nucleotide-disulfide oxidoreductaseQuickGO ontologyBLASTP
22499672250821855hypothetical proteinBLASTP
22513822251627246copper-binding proteinQuickGO ontologyBLASTP
22520302252392363bactoprenol-linked glucose translocaseQuickGO ontologyBLASTP
22523892253315927bactoprenol glucosyltransferaseQuickGO ontologyBLASTP
22564482257044597fimbriae w proteinQuickGO ontologyBLASTP
22572092257517309hypothetical proteinBLASTP
22575362258258723fimbriae Y proteinQuickGO ontologyBLASTP
22588622259494633transcriptional regulator FimZQuickGO ontologyBLASTP
22595402260058519fimbrial proteinQuickGO ontologyBLASTP
226006822610751008FimH proteinQuickGO ontologyBLASTP
226109022637022613outer membrane usher protein FimDQuickGO ontologyBLASTP
22637332264425693fimbrial chaperone proteinQuickGO ontologyBLASTP
22644692265002534hypothetical proteinBLASTP
22650772265634558type-1 fimbrial protein a chainQuickGO ontologyBLASTP
22661692267035867bifunctional 510-methylene-tetrahydrofolate dehydrogenase 510-methylene-tetrahydrofolate cyclohydrolaseQuickGO ontologyBLASTP
22670372267249213hypothetical proteinBLASTP