Pre_GI Gene

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Host: NC_012483 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012483:1841000 Acidobacterium capsulatum ATCC 51196, complete genome

Host Lineage: Acidobacterium capsulatum; Acidobacterium; Acidobacteriaceae; Acidobacteriales; Acidobacteria; Bacteria

General Information: Isolated from acidic mine drainage in Yanahara mine, Okayama, Japan. Acidophilic bacterium. This genus comprises a number of species commonly found in water reservoirs, microbial mats, many different soil types, marine and freshwater sediments, as well as in hot-spring mats and sediments, etc. Furthermore, they sometimes form the dominant group in a habitat. These bacteria are involved in the first step of destruction of biologically complex molecules produced by autotrophic (capable of synthesizing their own nutrients) microorganisms. Acidobacterium capsulatum is an aerobic, mesophilic, chemo-organotroph able to use a variety of carbon sources and to grow up to pH 6.0. The species comprises several strains characterized by orange pigmentation, production of menoquinones as their sole quinones, and branched-chain iso fatty acids as their cell envelope components.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
18411021841935834hypothetical proteinBLASTP
18424981842599102hypothetical protein
184284318440811239HipA family proteinQuickGO ontologyBLASTP
18440711844406336Transcriptional regulatorQuickGO ontologyBLASTP
18447141844980267IS3 family transposase orfAQuickGO ontologyBLASTP
184514918466331485hypothetical protein
18466301846947318transcriptional regulator PadR familyQuickGO ontologyBLASTP
18470311847804774efflux ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
184779718495811785hypothetical protein
18495641849671108hypothetical protein
184998718512641278phage integrase family proteinQuickGO ontologyBLASTP
185240318542051803hypothetical proteinBLASTP
185421118560011791hypothetical proteinBLASTP
18585021858750249hypothetical protein
18591561859770615hypothetical proteinBLASTP
186010618623912286KAP family P-loop domain proteinQuickGO ontologyBLASTP
18628011863268468conserved hypothetical protein TIGR02293QuickGO ontologyBLASTP
186403918671793141heavy metal efflux pump CzcA familyQuickGO ontologyBLASTP
186717618682971122efflux transporter RND family MFP subunitQuickGO ontologyBLASTP