Pre_GI: BLASTP Hits

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Query: NC_009455:273519:322188 Dehalococcoides sp. BAV1 chromosome, complete genome

Start: 322188, End: 323684, Length: 1497

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013061:987744:1008131100813110095371407Pedobacter heparinus DSM 2366, complete genomePolynucleotide adenylyltransferase region2e-31137
NC_015682:736746:7613547613547628081455Thermodesulfobacterium sp. OPB45 chromosome, complete genomepolynucleotide adenylyltransferase/metal dependent phosphohydrolase3e-29130
NC_019978:2036779:2039084203908420404271344Halobacteroides halobius DSM 5150, complete genometRNA nucleotidyltransferase/poly(A) polymerase2e-27124
NC_010816:1660066:1682613168261316840281416Bifidobacterium longum DJO10A, complete genometRNA nucleotidyltransferase5e-26119
NC_015510:1012195:1034797103479710362121416Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomepolynucleotide adenylyltransferase/metal dependent phosphohydrolase1e-25117
NC_015953:3684065:3710049371004937115661518Streptomyces sp. SirexAA-E chromosome, complete genomepolynucleotide adenylyltransferase/metal dependent phosphohydrolase2e-25117
NC_013929:5135285:5159095515909551605431449Streptomyces scabiei 87.22 chromosome, complete genomeRNA nucleotidyltransferase3e-25117
NC_021177:4041915:4048483404848340499251443Streptomyces fulvissimus DSM 40593, complete genomeRNA nucleotidyltransferase3e-24113
NC_003888:4251867:4290216429021642916671452Streptomyces coelicolor A3(2), complete genomeRNA nucleotidyltransferase9e-24112
NC_002932:937157:9385669385669399931428Chlorobium tepidum TLS, complete genomepolyA polymerase family protein1e-23111
NC_003155:5253923:5266959526695952684011443Streptomyces avermitilis MA-4680, complete genomeRNA nucleotidyltransferase3e-23110
NC_018750:3988196:3990822399082239922461425Streptomyces venezuelae ATCC 10712, complete genometRNA nucleotidyltransferase3e-22106
NC_016114:3655005:3665342366534236667871446Streptomyces flavogriseus ATCC 33331 chromosome, complete genomepolynucleotide adenylyltransferase4e-22106
NC_016610:1574699:1573283157328315747101428Tannerella forsythia ATCC 43037 chromosome, complete genometRNA nucleotidyltransferase/poly(A) polymerase family protein6e-22105
NC_013174:2712000:2731663273166327331411479Jonesia denitrificans DSM 20603, complete genomepolynucleotide adenylyltransferase/metal dependent phosphohydrolase8e-22105
NC_020125:1853208:1872286187228618737161431Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein8e-21102
NC_018607:2231975:2243583224358322449771395Brachyspira pilosicoli B2904 chromosome, complete genomepolyA polymerase family protein6e-21102
NC_014330:888366:8998558998559012491395Brachyspira pilosicoli 95/1000 chromosome, complete genomepolyA polymerase family protein6e-21102
NC_018604:2350054:2361636236163623630301395Brachyspira pilosicoli WesB complete genomepolyA polymerase family protein6e-21102
NC_019908:2312194:2319136231913623205301395Brachyspira pilosicoli P43/6/78 chromosome, complete genomepolyA polymerase family protein6e-21102
NC_021182:162236:1658591658591671991341Clostridium pasteurianum BC1, complete genometRNA nucleotidyltransferase/poly(A) polymerase1e-20101
NC_002939:2337402:2393737239373723950291293Geobacter sulfurreducens PCA, complete genomepolyA polymerase family protein2e-20100
NC_012590:2755429:2770150277015027717871638Corynebacterium aurimucosum ATCC 700975, complete genometRNA nucleotidyltransferase6e-2099.4
NC_019771:4922140:4939128493912849404081281Anabaena cylindrica PCC 7122, complete genomePolynucleotide adenylyltransferase region1e-1998.6
NC_014218:1948165:1968854196885419703471494Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomepolynucleotide adenylyltransferase/metal dependent phosphohydrolase2e-1997.8
NC_015145:4232283:4232283423228342337881506Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometRNA adenylyltransferase2e-1997.8
NC_011886:4376261:4376261437626143777691509Arthrobacter chlorophenolicus A6, complete genomepolynucleotide adenylyltransferase/metal dependent phosphohydrolase1e-1894.7
NC_010475:1563578:1576982157698215782051224Synechococcus sp. PCC 7002, complete genometRNA nucleotidyltransferase/poly(A) polymerase3e-1893.6
NC_008541:4679022:4679022467902246805121491Arthrobacter sp. FB24 chromosome 1, complete sequencemetal dependent phosphohydrolase5e-1892.8
NC_017095:1461520:1463201146320114658762676Fervidobacterium pennivorans DSM 9078 chromosome, complete genometRNA nucleotidyltransferase/poly(A) polymerase7e-1892.4
NC_015064:1722776:1737557173755717395211965Acidobacterium sp. MP5ACTX9 chromosome, complete genomePolynucleotide adenylyltransferase region2e-1791.3
NC_011653:1728000:1738962173896217415412580Thermosipho africanus TCF52B, complete genomepolyA polymerase family protein7e-1789
NC_003454:865368:8667398667398680941356Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completePoly(A) polymerase1e-1688.6
NC_016629:3308329:3340529334052933432372709Desulfovibrio africanus str. Walvis Bay chromosome, completePolynucleotide adenylyltransferase region3e-1687
NC_013642:505518:5100135100135126042592Thermotoga naphthophila RKU-10, complete genomePolynucleotide adenylyltransferase region1e-1585.1
NC_011126:1345984:1360945136094513634102466Hydrogenobaculum sp. Y04AAS1, complete genomePolynucleotide adenylyltransferase region2e-1584.3
NC_011978:1812000:1826275182627518288692595Thermotoga neapolitana DSM 4359, complete genomeTRNA nucleotidyl transferase-related protein2e-1584
NC_010730:1519458:1527748152774815302912544Sulfurihydrogenibium sp. YO3AOP1, complete genomePolynucleotide adenylyltransferase region3e-1584
NC_015557:1333158:1350977135097713534422466Hydrogenobaculum sp. 3684 chromosome, complete genomePolynucleotide adenylyltransferase region5e-1582.8
NC_020411:1333352:1351171135117113536362466Hydrogenobaculum sp. HO, complete genomePolynucleotide adenylyltransferase region5e-1582.8
NC_013171:416279:4203154203154216671353Anaerococcus prevotii DSM 20548, complete genomepolynucleotide adenylyltransferase/metal dependent phosphohydrolase7e-1582.4
NC_014393:187454:1874541874541886621209Clostridium cellulovorans 743B chromosome, complete genomepolynucleotide adenylyltransferase/metal dependent phosphohydrolase2e-1481.3
NC_017192:497950:5110945110945124911398Arcobacter sp. L, complete genometRNA nucleotidyltransferase/poly(A) polymerase8e-1479
NC_013173:1356526:1387166138716613885451380Desulfomicrobium baculatum DSM 4028, complete genomepolynucleotide adenylyltransferase/metal dependent phosphohydrolase9e-1478.6
NC_010814:903199:9031999031999058412643Geobacter lovleyi SZ, complete genomeCBS domain containing protein1e-1378.2
NC_013889:2561381:2582500258250025837321233Thioalkalivibrio sp. K90mix chromosome, complete genomepolynucleotide adenylyltransferase/metal dependent phosphohydrolase1e-1378.2
NC_014964:1169925:1169925116992511710911167Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completePolynucleotide adenylyltransferase region3e-1377.4
NC_010321:1177238:1177734117773411789001167Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completepolynucleotide adenylyltransferase3e-1377.4
NC_014538:1311500:1329022132902213301881167Thermoanaerobacter sp. X513 chromosome, complete genomepolynucleotide adenylyltransferase region9e-1272
NC_005070:2133380:2152369215236921535591191Synechococcus sp. WH 8102, complete genomePoly A polymerase family9e-1272
NC_014837:3739408:3739408373940837406401233Pantoea sp. At-9b chromosome, complete genomepolynucleotide adenylyltransferase/metal dependent phosphohydrolase1e-1171.6
NC_012967:3113768:3134725313472531359631239Escherichia coli B str. REL606 chromosome, complete genomemultifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase2e-1171.2
CP002185:3393813:3414622341462234158601239Escherichia coli W, complete genomefused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase2e-1170.9
NC_020541:268406:2745942745942758411248Rhodanobacter sp. 2APBS1, complete genometRNA nucleotidyltransferase/poly(A) polymerase3e-1170.5
NC_016012:16134:1970819708208801173Candidatus Arthromitus sp. SFB-rat-Yit, complete genomepolynucleotide adenylyltransferase4e-1170.1
NC_004545:15650:6471764717659761260Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genometRNA nucleotidyltransferase3e-1170.1
NC_000911:1718820:1734382173438217372102829Synechocystis sp. PCC 6803, complete genomepolyA polymerase3e-1170.1
NC_017039:1717848:1733410173341017362382829Synechocystis sp. PCC 6803 substr. PCC-P, complete genomepolyA polymerase3e-1170.1
NC_017052:1717836:1733398173339817362262829Synechocystis sp. PCC 6803 substr. PCC-N, complete genomepolyA polymerase3e-1170.1
NC_017277:1717637:1733199173319917360272829Synechocystis sp. PCC 6803, complete genomepolyA polymerase3e-1170.1
NC_007947:621213:6231536231536245111359Methylobacillus flagellatus KT, complete genomepoly(A) polymerase2e-1068.2
NC_008260:2340824:2340824234082423420561233Alcanivorax borkumensis SK2, complete genometRNA cytidylyltransferase1e-1068.2
NC_020126:5777895:5782348578234857836191272Myxococcus stipitatus DSM 14675, complete genomehypothetical protein2e-1067.4
NC_007530:1459412:1468725146872514699181194Bacillus anthracis str. 'Ames Ancestor', complete genomepolya polymerase4e-1066.6
NC_005945:1459357:1468679146867914698721194Bacillus anthracis str. Sterne, complete genomepolyA polymerase4e-1066.6
NC_015687:2145452:2166974216697421681551182Clostridium acetobutylicum DSM 1731 chromosome, complete genometRNA nucleotidyltransferase family protein7e-1065.9
NC_013316:4018451:401845140184514019155705Clostridium difficile R20291, complete genomehypothetical protein6e-1065.9
NC_014216:1787000:1806405180640518078051401Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomePolynucleotide adenylyltransferase8e-1065.5
NC_014392:969498:9932369932369944201185Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomePolynucleotide adenylyltransferase region2e-0964.7
NC_017047:4037674:4036082403608240376771596Rahnella aquatilis HX2 chromosome, complete genomepoly(A) polymerase I2e-0964.3
NC_008710:703740:7459547459547471771224Borrelia turicatae 91E135, complete genomepoly(A) polymerase7e-0962.8
NC_008095:4061899:4078577407857740798451269Myxococcus xanthus DK 1622, complete genometRNA nucleotidyltransferase/poly(A) polymerase family protein6e-0962.8
NC_011184:2421687:2446866244686624482931428Vibrio fischeri MJ11 chromosome I, complete sequencepoly(A) polymerase (PAP) (Plasmid copy number protein)5e-0962.8
NC_014720:1161841:1165421116542111666051185Caldicellulosiruptor kronotskyensis 2002 chromosome, completepolynucleotide adenylyltransferase region7e-0962.4
NC_013943:2547966:2549643254964325508001158Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomepolynucleotide adenylyltransferase1e-0862
NC_005061:65861:6677666776680111236Candidatus Blochmannia floridanus, complete genometRNA nucleotidyltransferase2e-0861.2
NC_016589:2875000:2907735290773529089791245Burkholderia sp. YI23 chromosome 1, complete sequencemultifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase2e-0861.2
NC_012034:1783912:1799910179991018010941185Anaerocellum thermophilum DSM 6725, complete genometRNA adenylyltransferase2e-0860.8
NC_010644:691374:7096487096487107721125Elusimicrobium minutum Pei191, complete genomepolynucleotide adenylyltransferase region3e-0860.5
NC_015949:1180755:1196626119662611978101185Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomepolynucleotide adenylyltransferase region4e-0860.1
NC_014914:439285:4421214421214432571137Taylorella equigenitalis MCE9 chromosome, complete genometRNA nucleotidyltransferase4e-0860.1
NC_014721:1777644:1793530179353017947141185Caldicellulosiruptor kristjanssonii 177R1B chromosome, completepolynucleotide adenylyltransferase region4e-0860.1
NC_015696:610000:6100386100386111441107Francisella sp. TX077308 chromosome, complete genometRNA nucleotidyltransferase4e-0860.1
NC_011415:146397:1590931590931605111419Escherichia coli SE11 chromosome, complete genomepoly(A) polymerase I5e-0859.7
NC_011750:156799:1692141692141706321419Escherichia coli IAI39 chromosome, complete genomepoly(A) polymerase I5e-0859.7
NC_008253:149693:1631781631781645961419Escherichia coli 536, complete genomepoly(A) polymerase5e-0859.7
NC_004431:153907:1682781682781696961419Escherichia coli CFT073, complete genomePoly(A) polymerase5e-0859.7
NC_013364:143492:1592611592611606251365Escherichia coli O111:H- str. 11128, complete genomepoly(A) polymerase5e-0859.7
NC_013361:145461:1604591604591618231365Escherichia coli O26:H11 str. 11368 chromosome, complete genomepoly(A) polymerase5e-0859.7
NC_009801:143426:1591951591951605591365Escherichia coli E24377A, complete genomepoly(A) polymerase5e-0859.7
NC_010468:3835259:3840667384066738420641398Escherichia coli ATCC 8739, complete genomepoly(A) polymerase5e-0859.7
NC_007946:149733:1637751637751651931419Escherichia coli UTI89, complete genomepoly(A) polymerase5e-0859.7
NC_011741:145276:1579721579721593901419Escherichia coli IAI1 chromosome, complete genomepoly(A) polymerase I5e-0859.7
CU928160:145276:1579721579721593901419Escherichia coli IAI1 chromosome, complete genomepoly(A) polymerase I5e-0859.7
NC_011748:143755:1578301578301592481419Escherichia coli 55989, complete genomepoly(A) polymerase I5e-0859.7
CU928145:143755:1578301578301592481419Escherichia coli 55989 chromosome, complete genomepoly(A) polymerase I5e-0859.7
NC_011742:149732:1637741637741651921419Escherichia coli S88 chromosome, complete genomepoly(A) polymerase I5e-0859.7
NC_011745:149594:1637301637301651481419Escherichia coli ED1a chromosome, complete genomepoly(A) polymerase I5e-0859.7
NC_010473:118681:1318331318331332301398Escherichia coli str. K-12 substr. DH10B, complete genomepoly(A) polymerase I5e-0859.7
NC_013353:143358:1591271591271604911365Escherichia coli O103:H2 str. 12009, complete genomepoly(A) polymerase5e-0859.7
NC_011601:149428:1635531635531649171365Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomepoly(A) polymerase5e-0859.7
AP010958:143358:1591271591271604911365Escherichia coli O103:H2 str. 12009 DNA, complete genomepoly(A) polymerase I5e-0859.7
NC_010498:153755:1681341681341694981365Escherichia coli SMS-3-5, complete genomepoly(A) polymerase5e-0859.7
CP002185:146389:1590851590851604491365Escherichia coli W, complete genomepoly(A) polymerase I5e-0859.7
NC_008563:149709:1637511637511651151365Escherichia coli APEC O1, complete genomepoly(A) polymerase I5e-0859.7
NC_012967:145582:1605801605801619441365Escherichia coli B str. REL606 chromosome, complete genomepoly(A) polymerase I5e-0859.7
NC_016902:3949061:3951421395142139528181398Escherichia coli KO11FL chromosome, complete genomepoly(A) polymerase5e-0859.7
NC_012947:3619384:3621723362172336231411419Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completepoly(A) polymerase I5e-0859.7
NC_012759:144576:1577281577281591251398Escherichia coli BW2952 chromosome, complete genomepoly(A) polymerase I5e-0859.7
CP002516:3949061:3951421395142139528181398Escherichia coli KO11, complete genomepoly(A) polymerase5e-0859.7
NC_000913:144577:1577291577291591261398Escherichia coli K12, complete genomepoly(A) polymerase I5e-0859.7
AC_000091:144577:1577291577291591261398Escherichia coli W3110 DNA, complete genomepoly(A) polymerase I5e-0859.7
NC_009437:2367842:2383667238366723848511185Caldicellulosiruptor saccharolyticus DSM 8903, complete genometRNA adenylyltransferase7e-0859.3
NC_010718:2492895:2508488250848825098701383Natranaerobius thermophilus JW/NM-WN-LF, complete genomePolynucleotide adenylyltransferase region7e-0859.3
NC_011244:746801:7602337602337615311299Borrelia recurrentis A1, complete genometRNA nucleotidyltransferase (CCA-adding enzyme)7e-0859.3
NC_009465:171000:1956051956051966691065Candidatus Vesicomyosocius okutanii HA, complete genometRNA nucleotidyltransferase (CCA-adding enzyme)9e-0858.9
NC_014657:1518721:1535068153506815362521185Caldicellulosiruptor owensensis OL chromosome, complete genomepolynucleotide adenylyltransferase region1e-0758.5
NC_007951:4608560:4631676463167646329141239Burkholderia xenovorans LB400 chromosome 1, complete sequencetRNA nucleotidyltransferase1e-0758.5
NC_014654:1529500:1546487154648715481331647Halanaerobium sp. 'sapolanicus' chromosome, complete genomePolynucleotide adenylyltransferase region1e-0758.5
NC_011740:165363:1797151797151811331419Escherichia fergusonii ATCC 35469, complete genomepoly(A) polymerase I2e-0757.8
NC_014652:1032711:1058050105805010592341185Caldicellulosiruptor hydrothermalis 108 chromosome, completepolynucleotide adenylyltransferase region3e-0757.4
NC_014393:2771774:2801555280155528029191365Clostridium cellulovorans 743B chromosome, complete genomePolynucleotide adenylyltransferase region4e-0756.6