Pre_GI Gene

Some Help

Host: NC_013353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013353:143358 Escherichia coli O103:H2 str. 12009, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
143358144020663carbonic anhydraseQuickGO ontologyBLASTP
144129145055927transporter subunitQuickGO ontologyBLASTP
145052145822771transporter subunitQuickGO ontologyBLASTP
145927146367441PTS Enzyme IIAQuickGO ontologyBLASTP
1464311476601230polysaccharide deacetylase lipoproteinQuickGO ontologyBLASTP
147664148044381aspartate 1-decarboxylaseQuickGO ontologyBLASTP
148318149220903hypothetical proteinBLASTP
149294150145852pantothenate synthetaseQuickGO ontologyBLASTP
1501571509517953-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
1510641523381275fimbrial-like protein yadC precursorQuickGO ontologyBLASTP
152391152987597fimbrial proteinQuickGO ontologyBLASTP
153014153616603fimbrial proteinQuickGO ontologyBLASTP
153631154200570fimbrial proteinQuickGO ontologyBLASTP
1542171568172601outer membrane porin proteinQuickGO ontologyBLASTP
156852157592741pilin chaperoneQuickGO ontologyBLASTP
157697158281585fimbrial-like proteinQuickGO ontologyBLASTP
1586511591304802-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseQuickGO ontologyBLASTP
1591271604911365polyA polymeraseQuickGO ontologyBLASTP
160584161510927glutamyl-Q tRNAAsp synthetaseQuickGO ontologyBLASTP
161547162002456DNA-binding transcriptional regulator DskA of rRNA transcription DnaK suppressor proteinQuickGO ontologyBLASTP
162180162884705DNA-binding transcriptional regulator SfsAQuickGO ontologyBLASTP
1628991634295312-5 RNA ligaseQuickGO ontologyBLASTP
1635031659322430ATP-dependent helicase HrpBQuickGO ontologyBLASTP