Pre_GI Gene

Some Help

Host: NC_013364 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013364:143492 Escherichia coli O111:H- str. 11128, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
143492144154663carbonic anhydraseQuickGO ontologyBLASTP
144263145189927putative transporter subunitQuickGO ontologyBLASTP
145186145956771putative transporter subunitQuickGO ontologyBLASTP
146061146501441putative PTS Enzyme IIAQuickGO ontologyBLASTP
1465651477941230putative polysaccharide deacetylase lipoproteinQuickGO ontologyBLASTP
147798148178381aspartate 1-decarboxylaseQuickGO ontologyBLASTP
148452149354903hypothetical proteinBLASTP
149428150279852pantothenate synthetaseQuickGO ontologyBLASTP
1502911510857953-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
152525153121597putative fimbrial proteinQuickGO ontologyBLASTP
153148153750603putative fimbrial proteinQuickGO ontologyBLASTP
153765154334570putative fimbrial proteinQuickGO ontologyBLASTP
1543511569512601putative outer membrane porin proteinQuickGO ontologyBLASTP
156986157726741putative pilin chaperoneQuickGO ontologyBLASTP
157831158415585putative fimbrial-like proteinQuickGO ontologyBLASTP
1587851592644802-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseQuickGO ontologyBLASTP
1592611606251365polyA polymeraseQuickGO ontologyBLASTP
160718161644927glutamyl-Q tRNAAsp synthetaseQuickGO ontologyBLASTP
161681162136456DNA-binding transcriptional regulator DskAQuickGO ontologyBLASTP
162314163018705putative DNA-binding transcriptional regulator SfsAQuickGO ontologyBLASTP
1630331635635312-5 RNA ligaseQuickGO ontologyBLASTP
1636371660662430putative ATP-dependent helicase HrpBQuickGO ontologyBLASTP