Pre_GI Gene

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Host: NC_008253 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:149693 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
149693150133441putative PTS system IIA component YadiQuickGO ontologyBLASTP
1501971514261230YadE protein polysaccharide deacetylaseQuickGO ontologyBLASTP
151430151810381aspartate 1-decarboxylase precursorQuickGO ontologyBLASTP
152084153016933putative transposase YhgA-likeQuickGO ontologyBLASTP
153085153288204putative transposase YhgA-likeQuickGO ontologyBLASTP
153370154221852pantoate-beta-alanine ligaseQuickGO ontologyBLASTP
1542331550277953-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
155139155453315hypothetical proteinBLASTP
155557156402846hypothetical proteinBLASTP
156452157048597protein YadKQuickGO ontologyBLASTP
157075157683609hypothetical protein YadL precursorQuickGO ontologyBLASTP
157695158261567hypothetical protein YadM precursorQuickGO ontologyBLASTP
1582781608662589outer membrane usher protein HtrE precursorQuickGO ontologyBLASTP
160901161641741chaperone protein EcpD precursorQuickGO ontologyBLASTP
161750162340591hypothetical fimbrial-like protein YadN precursorQuickGO ontologyBLASTP
1627021631814802-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseQuickGO ontologyBLASTP
1631781645961419polyA polymeraseQuickGO ontologyBLASTP
164635165561927glutamyl-tRNA synthetaseQuickGO ontologyBLASTP
165598166053456DnaK suppressor proteinQuickGO ontologyBLASTP
166231166935705sugar fermentation stimulation proteinQuickGO ontologyBLASTP
1669501674895402-5 RNA ligaseQuickGO ontologyBLASTP
1675541699832430ATP-dependent helicase HrpBQuickGO ontologyBLASTP
1700771726112535penicillin-binding protein 1BQuickGO ontologyBLASTP