Pre_GI Gene

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Host: NC_010475 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010475:1563578 Synechococcus sp. PCC 7002, complete genome

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
156357815650351458hypothetical proteinBLASTP
15650451565962918oxidoreductase short chain dehydrogenasereductase familyQuickGO ontologyBLASTP
156595215671241173hypothetical protein
15671591567632474hypothetical protein
15679381568282345hypothetical protein
156858815715122925hypothetical protein
15716161572593978hypothetical protein
15729161573446531hypothetical proteinBLASTP
157353115749971467phosphoglucomutasephosphomannomutaseQuickGO ontologyBLASTP
15750371576023987hypothetical protein
15763671576900534adenylylsulfate kinaseQuickGO ontologyBLASTP
157698215782051224tRNA nucleotidyltransferasepolyA polymeraseQuickGO ontologyBLASTP
15783431579239897Rhodanese-like sulfurtransferaseQuickGO ontologyBLASTP
15795161580265750phosphoadenosine phosphosulfate reductaseQuickGO ontologyBLASTP
15804371580895459ribosomal protein L9QuickGO ontologyBLASTP
158095315825121560GGDEF domain proteinQuickGO ontologyBLASTP