Pre_GI Gene

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Host: NC_011748 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011748:143755 Escherichia coli 55989, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the diarrheagenic stools of an HIV-positive adult suffering from persistent watery diarrhea in Central African Republic. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
142832143758927putative transporter subunit ATP-binding component of ABC superfamilyQuickGO ontologyBLASTP
143755144525771putative transporter subunit membrane component of ABC superfamilyQuickGO ontologyBLASTP
144630145070441putative PTS Enzyme IIAQuickGO ontologyBLASTP
1451341463631230putative exported polysaccharide deacetylaseQuickGO ontologyBLASTP
146367146747381aspartate alpha-decarboxylaseQuickGO ontologyBLASTP
147021147923903putative transposaseQuickGO ontologyBLASTP
147997148848852pantoate--beta-alanine ligaseQuickGO ontologyBLASTP
1488601496547953-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
1497671510411275putative fimbrial-like adhesin proteinQuickGO ontologyBLASTP
151094151690597putative fimbrial-like adhesin proteinQuickGO ontologyBLASTP
151717152319603putative fimbrial-like adhesin proteinQuickGO ontologyBLASTP
152334152903570putative fimbrial-like adhesin exported proteinQuickGO ontologyBLASTP
1529201555202601putative outer membrane usher proteinQuickGO ontologyBLASTP
155555156295741putative chaperone protein EcpDQuickGO ontologyBLASTP
156400156984585putative fimbrial-like adhesin exported proteinQuickGO ontologyBLASTP
1573541578334802-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinaseQuickGO ontologyBLASTP
1578301592481419polyA polymerase IQuickGO ontologyBLASTP
159287160213927glutamyl-Q tRNAAsp synthetaseQuickGO ontologyBLASTP
160250160705456RNA polymerase-binding transcription factorQuickGO ontologyBLASTP
160883161587705sugar fermentation stimulation protein AQuickGO ontologyBLASTP
1616021621325312-5 RNA ligaseQuickGO ontologyBLASTP
1622061646352430ATP-dependent RNA helicase HrpBQuickGO ontologyBLASTP
1648311673652535penicillin-binding protein 1bQuickGO ontologyBLASTP