Pre_GI Gene

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Host: CP002516 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

CP002516:3949061 Escherichia coli KO11, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39490613949765705sugar fermentation stimulation proteinQuickGO ontologyBLASTP
39499433950398456transcriptional regulator TraRDksA familyQuickGO ontologyBLASTP
39504353951361927Glutamylglutaminyl-tRNA synthetase class Ic catalytic domain proteinQuickGO ontologyBLASTP
395142139528181398polyA polymeraseQuickGO ontologyBLASTP
395281539532944802-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseQuickGO ontologyBLASTP
39536643954248585Fimbrial protein domain-containing proteinQuickGO ontologyBLASTP
39543533955093741Pili assembly chaperone N-terminal proteinQuickGO ontologyBLASTP
395512839577282601fimbrial biogenesis outer membrane usher proteinQuickGO ontologyBLASTP
39577453958314570putative fimbrial-like adhesin exported proteinQuickGO ontologyBLASTP
39583293958931603Fimbrial protein domain-containing proteinQuickGO ontologyBLASTP
39589583959554597putative fimbrial proteinQuickGO ontologyBLASTP
395960739608811275Fimbrial protein domain-containing proteinQuickGO ontologyBLASTP
396099439617887953-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
39618003962651852pantoatebeta-alanine ligaseQuickGO ontologyBLASTP
39627253963684960transposase YhgA family proteinQuickGO ontologyBLASTP
39639013964281381aspartate 1-decarboxylaseQuickGO ontologyBLASTP
396428539655141230polysaccharide deacetylaseQuickGO ontologyBLASTP
39655783966018441PTS system fructose subfamily IIA componentQuickGO ontologyBLASTP
39661233966893771ABC-2 type transporterQuickGO ontologyBLASTP
39668903967816927ABC transporter related proteinQuickGO ontologyBLASTP