Pre_GI Gene

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Host: NC_008563 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008563:149709 Escherichia coli APEC O1, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
148786149712927putative ABC transporter ATP-binding protein YadGQuickGO ontologyBLASTP
149709150479771hypothetical proteinBLASTP
150584151024441putative PTS system IIA component YadIQuickGO ontologyBLASTP
1510881523171230hypothetical proteinBLASTP
152321152701381hypothetical proteinBLASTP
152975153859885hypothetical proteinBLASTP
153941154792852pantoate-beta-alanine ligaseQuickGO ontologyBLASTP
1548041555987953-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
1557101569751266putative fimbrial adhesin YadC precursorQuickGO ontologyBLASTP
157025157621597hypothetical proteinBLASTP
157648158262615hypothetical proteinBLASTP
158268158834567putative fimbrial-like adhesin proteinQuickGO ontologyBLASTP
1588511614392589outer membrane usher protein HtrE precursorQuickGO ontologyBLASTP
161474162214741predicted periplasmic pilin chaperoneQuickGO ontologyBLASTP
162323162937615putative fimbrial-like adhesin proteinQuickGO ontologyBLASTP
1632751637544802-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinaseQuickGO ontologyBLASTP
1637511651151365polyA polymerase IQuickGO ontologyBLASTP
165208166134927glutamyl-Q tRNAAsp synthetaseQuickGO ontologyBLASTP
166171166644474DnaK suppressor proteinQuickGO ontologyBLASTP
166804167508705sugar fermentation stimulation proteinQuickGO ontologyBLASTP
1675231682667442-5 RNA ligaseQuickGO ontologyBLASTP
1680821705562475ATP-dependent helicase HrpBQuickGO ontologyBLASTP
1706501731842535penicillin-binding protein 1bQuickGO ontologyBLASTP