Pre_GI Gene

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Host: NC_011742 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011742:149732 Escherichia coli S88 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
148809149735927transporter subunit ATP-binding component of ABC superfamilyQuickGO ontologyBLASTP
149732150502771transporter subunit membrane component of ABC superfamilyQuickGO ontologyBLASTP
150607151047441PTS Enzyme IIAQuickGO ontologyBLASTP
1511111523401230exported polysaccharide deacetylaseQuickGO ontologyBLASTP
152344152724381aspartate alpha-decarboxylaseQuickGO ontologyBLASTP
152998153882885transposaseQuickGO ontologyBLASTP
153964154815852pantoate--beta-alanine ligaseQuickGO ontologyBLASTP
1548271556217953-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
1557331570221290fimbrial-like adhesin proteinQuickGO ontologyBLASTP
157048157644597protein yadK fimbrial-like adhesinQuickGO ontologyBLASTP
157671158285615fimbrial-like adhesin protein YadLQuickGO ontologyBLASTP
158291158857567fimbrial-like adhesin protein YadMQuickGO ontologyBLASTP
1588741614622589outer membrane usher proteinQuickGO ontologyBLASTP
161497162237741chaperone protein EcpDQuickGO ontologyBLASTP
162346162960615fimbrial-like adhesin exported proteinQuickGO ontologyBLASTP
1632981637774802-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseQuickGO ontologyBLASTP
1637741651921419polyA polymerase IQuickGO ontologyBLASTP
165231166157927glutamyl-Q tRNAAsp synthetaseQuickGO ontologyBLASTP
166194166649456RNA polymerase-binding transcription factorQuickGO ontologyBLASTP
166827167531705sugar fermentation stimulation protein AQuickGO ontologyBLASTP
1675461680765312-5 RNA ligaseQuickGO ontologyBLASTP
1681501705792430ATP-dependent RNA helicase HrpBQuickGO ontologyBLASTP
1706731732072535penicillin-binding protein 1bQuickGO ontologyBLASTP