Pre_GI Gene

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Host: NC_013361 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013361:145461 Escherichia coli O26:H11 str. 11368 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O26:H11 str. 11368 is a human enterohemorrhagic E. coli which attaches to and effaces cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
145461146387927transporter subunitQuickGO ontologyBLASTP
146384147154771transporter subunitQuickGO ontologyBLASTP
147259147699441PTS Enzyme IIAQuickGO ontologyBLASTP
1477631489921230polysaccharide deacetylaseQuickGO ontologyBLASTP
148996149376381aspartate alpha-decarboxylaseQuickGO ontologyBLASTP
149650150552903hypothetical proteinBLASTP
150626151477852pantoate--beta-alanine ligaseQuickGO ontologyBLASTP
1514891522837953-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
153723154319597fimbrial proteinQuickGO ontologyBLASTP
154346154948603fimbrial proteinQuickGO ontologyBLASTP
154963155532570fimbrial proteinQuickGO ontologyBLASTP
1555491581492601outer membrane usher proteinQuickGO ontologyBLASTP
158184158924741chaperone protein EcpDQuickGO ontologyBLASTP
159029159613585fimbrialQuickGO ontologyBLASTP
1599831604624802-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseQuickGO ontologyBLASTP
1604591618231365polyA polymeraseQuickGO ontologyBLASTP
161916162842927glutamyl-Q tRNAAsp synthetaseQuickGO ontologyBLASTP
162879163334456RNA polymerase-binding transcription factorQuickGO ontologyBLASTP
163512164216705sugar fermentation stimulation protein AQuickGO ontologyBLASTP
1642311647615312-5 RNA ligaseQuickGO ontologyBLASTP
1648351672642430ATP-dependent RNA helicase HrpBQuickGO ontologyBLASTP
1673961699302535penicillin-binding protein 1bQuickGO ontologyBLASTP