Pre_GI Gene

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Host: AP010958 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

AP010958:143358 Escherichia coli O103:H2 str. 12009 DNA, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
143358144020663carbonic anhydraseQuickGO ontologyBLASTP
144129145055927predicted transporter subunitQuickGO ontologyBLASTP
145052145822771predicted transporter subunitQuickGO ontologyBLASTP
145927146367441predicted PTS Enzyme IIAQuickGO ontologyBLASTP
1464311476601230predicted polysaccharide deacetylase lipoproteinQuickGO ontologyBLASTP
147664148044381aspartate 1-decarboxylaseQuickGO ontologyBLASTP
148318149220903conserved predicted proteinQuickGO ontologyBLASTP
149294150145852pantothenate synthetaseQuickGO ontologyBLASTP
1501571509517953-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
1510641523381275putative fimbrial-like protein yadC precursorQuickGO ontologyBLASTP
152391152987597putative fimbrial proteinQuickGO ontologyBLASTP
153014153616603putative fimbrial proteinQuickGO ontologyBLASTP
153631154200570putative fimbrial proteinQuickGO ontologyBLASTP
1542171568172601probable outer membrane porin proteinQuickGO ontologyBLASTP
156852157592741probable pilin chaperoneQuickGO ontologyBLASTP
157697158281585putative fimbrial-like proteinQuickGO ontologyBLASTP
1586511591304802-amino-4-hydroxy-6- hydroxymethyldihyropteridine pyrophosphokinaseQuickGO ontologyBLASTP
1591271604911365polyA polymerase IQuickGO ontologyBLASTP
160584161510927glutamyl-Q tRNAAsp synthetaseQuickGO ontologyBLASTP
161547162002456DNA-binding transcriptional regulator DskA of rRNA transcription DnaK suppressor proteinQuickGO ontologyBLASTP
162180162884705predicted DNA-binding transcriptional regulator SfsAQuickGO ontologyBLASTP
1628991634295312-5 RNA ligaseQuickGO ontologyBLASTP
1635031659322430predicted ATP-dependent helicase HrpBQuickGO ontologyBLASTP