Pre_GI Gene

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Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:153755 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
152832153758927ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
153755154525771ABC transporter permease proteinQuickGO ontologyBLASTP
154630155070441PTS system IIA component domain-containing proteinQuickGO ontologyBLASTP
1551341563631230polysaccharide deacetylase domain-containing proteinQuickGO ontologyBLASTP
156367156747381aspartate 1-decarboxylaseQuickGO ontologyBLASTP
157021157941921ISNCY family transposaseQuickGO ontologyBLASTP
158010158225216hypothetical proteinBLASTP
158307159158852pantoate--beta-alanine ligaseQuickGO ontologyBLASTP
1591701599647953-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
1600761613471272putative fimbrial proteinQuickGO ontologyBLASTP
161401161997597putative fimbrial proteinQuickGO ontologyBLASTP
162024162629606hypothetical proteinBLASTP
162644163210567fimbrial proteinQuickGO ontologyBLASTP
1632301658302601outer membrane usher protein HtrEQuickGO ontologyBLASTP
165865166605741periplasmic pilus chaperone family proteinQuickGO ontologyBLASTP
166703167287585fimbrial proteinQuickGO ontologyBLASTP
1676581681374802-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseQuickGO ontologyBLASTP
1681341694981365polyA polymeraseQuickGO ontologyBLASTP
169591170517927glutamyl-Q tRNAAsp synthetaseQuickGO ontologyBLASTP
170554171009456RNA polymerase-binding protein DksAQuickGO ontologyBLASTP
171187171891705sugar fermentation stimulation proteinQuickGO ontologyBLASTP
1719061724365312-5 RNA ligaseQuickGO ontologyBLASTP
1724651749392475ATP-dependent helicase HrpBQuickGO ontologyBLASTP
1750331775672535penicillin-binding protein 1BQuickGO ontologyBLASTP