Pre_GI Gene

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Host: NC_010816 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010816:1660066 Bifidobacterium longum DJO10A, complete genome

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This organism is found in adult humans and formula fed infants as a normal component of gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
166006616621562091Type IIA topoisomerase B subunitQuickGO ontologyBLASTP
16623371662807471Zn-ribbon-containing RNA-binding proteinQuickGO ontologyBLASTP
166280416639911188Recombinational DNA repair ATPaseQuickGO ontologyBLASTP
166407016651941125DNA polymerase sliding clamp subunitQuickGO ontologyBLASTP
166592916674311503ATPase for DNA replication initiationQuickGO ontologyBLASTP
16677501667884135Ribosomal protein L34QuickGO ontologyBLASTP
16679171668276360RNase P protein componentQuickGO ontologyBLASTP
166858716695941008Preprotein translocase subunitQuickGO ontologyBLASTP
16697181670251534Hypothetical RNA-binding proteinQuickGO ontologyBLASTP
16704031671068666Putative S-adenosylmethionine-dependent methyltransferase for bacterial cell divisionQuickGO ontologyBLASTP
16713191672290972ATPase for chromosome partitioningQuickGO ontologyBLASTP
167237716736511275Putative transcriptional regulatorQuickGO ontologyBLASTP
167395816749771020Thioredoxin reductaseQuickGO ontologyBLASTP
167509716771602064hypothetical proteinBLASTP
167724316789701728Hypothetical membrane proteinQuickGO ontologyBLASTP
167896716811682202hypothetical proteinBLASTP
168123416825261293ADP-ribose pyrophosphataseQuickGO ontologyBLASTP
168261316840281416tRNA nucleotidyltransferaseQuickGO ontologyBLASTP