Pre_GI Gene

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Host: NC_004431 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004431:153907 Escherichia coli CFT073, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
152984153910927Hypothetical ABC transporter ATP-binding protein yadGQuickGO ontologyBLASTP
153907154677771Hypothetical protein yadHQuickGO ontologyBLASTP
154782155222441Putative PTS system IIA component yadIQuickGO ontologyBLASTP
1552861565151230Hypothetical protein yadE precursorQuickGO ontologyBLASTP
156519156899381aspartate 1-decarboxylase precursorQuickGO ontologyBLASTP
156867157052186hypothetical proteinBLASTP
157173158117945Hypothetical protein yadDQuickGO ontologyBLASTP
158186158383198hypothetical proteinBLASTP
158465159238774pantoate--beta-alanine ligaseQuickGO ontologyBLASTP
1593291601237953-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
1602351615241290Hypothetical fimbrial-like protein yadC precursorQuickGO ontologyBLASTP
161550162146597Protein yadKQuickGO ontologyBLASTP
162173162787615Hypothetical protein yadL precursorQuickGO ontologyBLASTP
162793163359567Hypothetical protein yadM precursorQuickGO ontologyBLASTP
1633761659642589Outer membrane usher protein htrE precursorQuickGO ontologyBLASTP
165999166739741Chaperone protein ecpD precursorQuickGO ontologyBLASTP
166848167462615Hypothetical fimbrial-like protein yadN precursorQuickGO ontologyBLASTP
167431167571141hypothetical protein
167479167607129hypothetical protein
1678021682814802-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseQuickGO ontologyBLASTP
1682781696961419PolyA polymeraseQuickGO ontologyBLASTP
169735170661927glutamyl-tRNA synthetaseQuickGO ontologyBLASTP
170698171171474DnaK suppressor proteinQuickGO ontologyBLASTP
171331172035705sugar fermentation stimulation proteinQuickGO ontologyBLASTP
1720501725895402-5 RNA ligaseQuickGO ontologyBLASTP
1726091750832475ATP-dependent helicase hrpBQuickGO ontologyBLASTP
175011175178168hypothetical proteinBLASTP
1751771777112535penicillin-binding protein 1bQuickGO ontologyBLASTP