Pre_GI Gene

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Host: NC_012947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012947:3619384 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
36193843620088705sugar fermentation stimulation protein AQuickGO ontologyBLASTP
36202663620721456RNA polymerase-binding transcription factorQuickGO ontologyBLASTP
36207583621684927glutamyl-Q tRNAAsp synthetaseQuickGO ontologyBLASTP
362172336231411419polyA polymerase IQuickGO ontologyBLASTP
362313836236174802-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinaseQuickGO ontologyBLASTP
36239873624571585fimbrial proteinQuickGO ontologyBLASTP
36246763625416741chaperone protein EcpDQuickGO ontologyBLASTP
362545136280512601outer membrane usher proteinQuickGO ontologyBLASTP
36280683628637570fimbrial-like adhesin exported proteinQuickGO ontologyBLASTP
36286523629254603fimbrial proteinQuickGO ontologyBLASTP
36292813629877597fimbrial proteinQuickGO ontologyBLASTP
362993036312041275fimbrial-like adhesin proteinQuickGO ontologyBLASTP
363131736321117953-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
36321233632974852pantoate--beta-alanine ligaseQuickGO ontologyBLASTP
36330483633950903transposase YhgA family proteinQuickGO ontologyBLASTP
36342243634604381aspartate alpha-decarboxylaseQuickGO ontologyBLASTP
363460836358371230polysaccharide deacetylaseQuickGO ontologyBLASTP
36359013636341441PTS system fructose subfamily IIA componentQuickGO ontologyBLASTP
36364463637216771ABC transporterQuickGO ontologyBLASTP
36372133638139927ABC transporterQuickGO ontologyBLASTP
36382483638910663carbonic anhydraseQuickGO ontologyBLASTP
36389513639499549hypoxanthine phosphoribosyltransferaseQuickGO ontologyBLASTP