Pre_GI: BLASTP Hits

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Query: NC_005363:1604337:1618384 Bdellovibrio bacteriovorus HD100, complete genome

Start: 1618384, End: 1619271, Length: 888

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007677:771168:793870793870794766897Salinibacter ruber DSM 13855, complete genomeformyltransferase, putative8e-80297
NC_006510:3133965:314667931466793147578900Geobacillus kaustophilus HTA426, complete genomemethionyl-tRNA formyltransferase1e-79296
NC_015660:391627:403139403139404038900Geobacillus thermoglucosidasius C56-YS93 chromosome, completemethionyl-tRNA formyltransferase1e-79296
NC_010516:2877407:289080628908062891693888Clostridium botulinum B1 str. Okra, complete genomebifunctional polymyxin resistance protein ArnA2e-58225
NC_016815:1085462:110007611000761100990915Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceputative formyltransferase, similar to methionyl-tRNA(fMet) N-formyltransferase protein1e-26120
NC_018000:3371829:337601133760113376925915Sinorhizobium fredii USDA 257 chromosome, complete genomemethionyl-tRNA formyltransferase Fmt4e-25115
NC_008700:2701500:271077727107772711610834Shewanella amazonensis SB2B, complete genomeMethionyl-tRNA formyltransferase1e-24113
NC_002928:123126:131817131817132755939Bordetella parapertussis 12822, complete genomeputative formyl transferase4e-24112
NC_011146:3426500:344807334480733448984912Geobacter bemidjiensis Bem, complete genomeformyl transferase domain protein7e-23107
NC_011026:2533017:256481825648182565810993Chloroherpeton thalassium ATCC 35110, complete genomeformyl transferase domain protein1e-21103
NC_007164:2046937:206666720666672067611945Corynebacterium jeikeium K411, complete genomeputative formyltransferase2e-21103
NC_002695:4153394:416922641692264170173948Escherichia coli O157:H7 str. Sakai, complete genomemethionyl-tRNA formyltransferase1e-20100
CP002185:3627992:364718336471833648130948Escherichia coli W, complete genome10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase3e-2099.4
NC_014394:707305:710584710584711570987Gallionella capsiferriformans ES-2 chromosome, complete genomeformyl transferase domain-containing protein3e-2099.4
NC_013282:3962188:397907139790713980018948Cronobacter turicensis, complete genomeMethionyl-tRNA formyltransferase5e-2098.2
NC_010545:404111:416079416079416978900Corynebacterium urealyticum DSM 7109, complete genomeputative formyltransferase2e-1996.7
NC_017047:3085000:3129784312978431317661983Rahnella aquatilis HX2 chromosome, complete genomebifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase3e-1995.9
NC_013093:1213908:121735212173521218302951Actinosynnema mirum DSM 43827, complete genomeformyl transferase domain protein4e-1995.5
NC_008260:125500:141159141159142151993Alcanivorax borkumensis SK2, complete genomemethionyl-tRNA formyltransferase6e-1995.1
NC_007517:3751107:375394837539483754883936Geobacter metallireducens GS-15, complete genomeMethionyl-tRNA formyltransferase2e-1893.2
NC_018419:1110000:1118217111821711201991983Secondary endosymbiont of Ctenarytaina eucalypti chromosome,methionyl-tRNA formyltransferase1e-1790.9
NC_002570:2616899:262698426269842627937954Bacillus halodurans C-125, complete genomemethionyl-tRNA formyltransferase3e-1789.4
NC_005773:3220500:3248304324830432502951992Pseudomonas syringae pv. phaseolicola 1448A, complete genomeUDP-D-glucuronate dehydrogenase5e-1788.6
NC_006511:3364448:338384833838483384795948Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCmethionyl-tRNA formyltransferase5e-1788.6
NC_011726:1605600:162320816232081624206999Cyanothece sp. PCC 8801, complete genomemethionyl-tRNA formyltransferase9e-1684.3
NC_009802:1525144:1540599154059915416061008Campylobacter concisus 13826, complete genomeadenine phosphoribosyltransferase (aprt)8e-1581.3
NC_009012:686740:695783695783696718936Clostridium thermocellum ATCC 27405, complete genomemethionyl-tRNA formyltransferase2e-1480.1
NC_014657:944000:944033944033944953921Caldicellulosiruptor owensensis OL chromosome, complete genomemethionyl-tRNA formyltransferase1e-1377.4
NC_008312:2690000:2692226269222626932361011Trichodesmium erythraeum IMS101, complete genomemethionyl-tRNA formyltransferase1e-1377.4
NC_018644:1263891:126781312678131268730918Alpha proteobacterium HIMB59 chromosome, complete genomeFormyl transferase,formyl transferase family protein2e-1377
NC_012225:445500:460296460296461177882Brachyspira hyodysenteriae WA1, complete genomemethionyl-tRNA formyltransferase2e-1376.6
NC_020209:4768500:481131448113144812267954Pseudomonas poae RE*1-1-14, complete genomemethionyl-tRNA formyltransferase2e-1376.3
NC_013192:171000:171547171547172497951Leptotrichia buccalis DSM 1135, complete genomemethionyl-tRNA formyltransferase1e-1274.3
NC_005061:214168:235306235306236277972Candidatus Blochmannia floridanus, complete genomemethionyl-tRNA formyltransferase1e-1274.3
NC_014933:2397518:239849823984982399415918Bacteroides helcogenes P 36-108 chromosome, complete genomeformyl transferase domain protein2e-1273.2
NC_016929:258500:267169267169268080912Rickettsia canadensis str. CA410 chromosome, complete genomemethionyl-tRNA formyltransferase3e-1272.8
NC_011833:545713:546959546959547903945Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,methionyl-tRNA formyltransferase4e-1272.4
NC_011834:546738:546738546738547682945Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,methionyl-tRNA formyltransferase4e-1272.4
NC_017253:545177:546422546422547366945Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,methionyl-tRNA formyltransferase4e-1272.4
NC_017254:545236:546482546482547426945Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,methionyl-tRNA formyltransferase4e-1272.4
NC_009879:260000:267486267486268397912Rickettsia canadensis str. McKiel, complete genomemethionyl-tRNA formyltransferase4e-1272.4
NC_015138:5276857:529894952989495299938990Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completemethionyl-tRNA formyltransferase4e-1272.4
NC_017252:545236:546482546482547375894Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,methionyl-tRNA formyltransferase3e-1272.4
NC_017255:545270:546517546517547446930Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,methionyl-tRNA formyltransferase4e-1272
NC_002928:123126:135205135205136029825Bordetella parapertussis 12822, complete genomeputative formyl transferase5e-1272
NC_015722:852000:856492856492857433942Candidatus Midichloria mitochondrii IricVA chromosome, completemethionyl-tRNA formyltransferase7e-1271.6
NC_015510:1978539:197853919785391979435897Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomemethionyl-tRNA formyltransferase1e-1170.9
NC_016830:81382:813828138282341960Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein9e-1270.9
NC_017044:278500:284512284512285423912Rickettsia parkeri str. Portsmouth chromosome, complete genomemethionyl-tRNA formyltransferase1e-1170.5
NC_008752:5213431:523377252337725234761990Acidovorax avenae subsp. citrulli AAC00-1, complete genomemethionyl-tRNA formyltransferase1e-1170.5
NC_016931:269537:277222277222278133912Rickettsia massiliae str. AZT80 chromosome, complete genomemethionyl-tRNA formyltransferase2e-1169.7
NC_012633:276500:282414282414283325912Rickettsia africae ESF-5, complete genomeMethionyl-tRNA formyltransferase3e-1169.3
NC_003103:266013:280029280029280940912Rickettsia conorii str. Malish 7, complete genomemethionyl-tRNA formyltransferase3e-1169.3
NC_015866:274550:285712285712286623912Rickettsia heilongjiangensis 054 chromosome, complete genomemethionyl-tRNA formyltransferase4e-1168.9
NC_015702:2505633:252357525235752524525951Parachlamydia acanthamoebae UV7, complete genomemethionyl-tRNA formyltransferase4e-1168.9
NC_017256:545204:546435546435547379945Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,methionyl-tRNA formyltransferase4e-1168.9
NC_017043:990395:100164110016411002552912Rickettsia montanensis str. OSU 85-930 chromosome, complete genomemethionyl-tRNA formyltransferase5e-1168.6
NC_015379:89441:894418944190400960Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Methionyl-tRNA formyltransferase1e-1067.8
NC_015713:2193610:221437122143712215312942Simkania negevensis Z chromosome gsn.131, complete genomemethionyl-tRNA formyltransferase9e-1167.8
NC_010263:278463:284357284357285268912Rickettsia rickettsii str. Iowa, complete genomemethionyl-tRNA formyltransferase9e-1167.8
NC_016908:278457:284349284349285260912Rickettsia rickettsii str. Colombia chromosome, complete genomemethionyl-tRNA formyltransferase9e-1167.8
NC_016909:278327:284222284222285133912Rickettsia rickettsii str. Arizona chromosome, complete genomemethionyl-tRNA formyltransferase9e-1167.8
NC_016911:278415:284310284310285221912Rickettsia rickettsii str. Hauke chromosome, complete genomemethionyl-tRNA formyltransferase9e-1167.8
NC_016913:859931:883837883837884748912Rickettsia rickettsii str. Brazil chromosome, complete genomemethionyl-tRNA formyltransferase9e-1167.8
NC_016914:278500:284443284443285354912Rickettsia rickettsii str. Hino chromosome, complete genomemethionyl-tRNA formyltransferase9e-1167.8
NC_012730:293634:305551305551306462912Rickettsia peacockii str. Rustic, complete genomemethionyl-tRNA formyltransferase8e-1167.8
NC_016915:278000:283992283992284903912Rickettsia rickettsii str. Hlp#2 chromosome, complete genomemethionyl-tRNA formyltransferase8e-1167.8
NC_011831:2728932:274597227459722746895924Chloroflexus aggregans DSM 9485, complete genomeformyl transferase domain protein1e-1067.4
NC_002620:936869:950094950094951044951Chlamydia muridarum Nigg, complete genomemethionyl-tRNA formyltransferase2e-1067
NC_010410:11201:287472874729709963Acinetobacter baumannii AYE, complete genomemethionyl-tRNA formyltransferase3e-1065.9
NC_017065:274165:285195285195286106912Rickettsia slovaca str. D-CWPP chromosome, complete genomemethionyl-tRNA formyltransferase4e-1065.5
NC_011565:190406:195171195171196145975Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,methionyl-tRNA formyltransferase5e-1065.1
NC_009881:283500:286415286415287311897Rickettsia akari str. Hartford, complete genomemethionyl-tRNA formyltransferase6e-1065.1
NC_008054:1194000:121463012146301215529900Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeMethionyl-tRNA formyltransferase9e-1064.3
NC_013854:2714033:273149127314912732447957Azospirillum sp. B510, complete genomemethionyl-tRNA formyltransferase9e-1064.3
NC_011992:3615517:363575736357573636728972Acidovorax ebreus TPSY, complete genomemethionyl-tRNA formyltransferase2e-0963.5
NC_013223:724394:737994737994738989996Desulfohalobium retbaense DSM 5692, complete genomeformyl transferase domain protein2e-0963.5
NC_017066:243913:254593254593255504912Rickettsia typhi str. TH1527 chromosome, complete genomemethionyl-tRNA formyltransferase2e-0963.5
NC_017062:244330:255010255010255921912Rickettsia typhi str. B9991CWPP chromosome, complete genomemethionyl-tRNA formyltransferase2e-0963.5
NC_007797:1016456:102634910263491027254906Anaplasma phagocytophilum HZ, complete genomemethionyl-tRNA formyltransferase2e-0963.2
NC_015408:404778:408421408421409371951Chlamydophila pecorum E58 chromosome, complete genomemethionyl-tRNA formyltransferase3e-0962.8
NC_009257:775538:797020797020797961942Francisella tularensis subsp. tularensis WY96-3418 chromosome,methionyl-tRNA formyltransferase3e-0962.8
NC_009882:278384:284293284293285189897Rickettsia rickettsii str. 'Sheila Smith', complete genomemethionyl-tRNA formyltransferase3e-0962.8
NC_011653:466007:468575468575469489915Thermosipho africanus TCF52B, complete genomefmt methionyl-tRNA formyltransferase5e-0962
NC_008767:84950:106592106592107518927Neisseria meningitidis FAM18, complete genomemethionyl-tRNA formyltransferase7e-0961.6
NC_017505:96293:117257117257118183927Neisseria meningitidis alpha710 chromosome, complete genomemethionyl-tRNA formyltransferase7e-0961.6
NC_017518:98639:119604119604120530927Neisseria meningitidis NZ-05/33 chromosome, complete genomemethionyl-tRNA formyltransferase7e-0961.6
NC_017517:98554:120116120116121042927Neisseria meningitidis M01-240355 chromosome, complete genomemethionyl-tRNA formyltransferase6e-0961.6
NC_017511:1883663:190483519048351905797963Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomehypothetical protein6e-0961.6
NC_003112:96815:118615118615119541927Neisseria meningitidis MC58, complete genomemethionyl-tRNA formyltransferase6e-0961.6
NC_009484:464342:465528465528466433906Acidiphilium cryptum JF-5 chromosome, complete genomemethionyl-tRNA formyltransferase6e-0961.6
NC_017516:96879:118679118679119605927Neisseria meningitidis H44/76 chromosome, complete genomemethionyl-tRNA formyltransferase6e-0961.6
NC_017501:96211:116960116960117886927Neisseria meningitidis 8013, complete genomemethionyl-tRNA formyltransferase8e-0961.2
NC_011035:1974489:199660119966011997527927Neisseria gonorrhoeae NCCP11945 chromosome, complete genomehypothetical protein8e-0961.2
NC_010611:3879190:388136738813673882329963Acinetobacter baumannii ACICU, complete genomeMethionyl-tRNA formyltransferase9e-0961.2
NC_006142:243899:254594254594255490897Rickettsia typhi str. Wilmington, complete genomemethionyl-tRNA formyltransferase1e-0860.8
NC_016639:274157:285202285202286098897Rickettsia slovaca 13-B chromosome, complete genomeMethionyl-tRNA formyltransferase1e-0860.8
NC_008346:800500:818645818645819526882Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeMethionyl-tRNA formyltransferase-like protein1e-0860.5
NC_009256:3601080:362352536235253624508984Burkholderia vietnamiensis G4 chromosome 1, complete sequencemethionyl-tRNA formyltransferase2e-0859.7
NC_017515:76861:124653124653125579927Neisseria meningitidis M04-240196 chromosome, complete genomemethionyl-tRNA formyltransferase3e-0859.3
NC_014761:2189500:221651822165182217444927Oceanithermus profundus DSM 14977 chromosome, complete genomemethionyl-tRNA formyltransferase3e-0859.3
NC_010655:1160384:116239111623911163335945Akkermansia muciniphila ATCC BAA-835, complete genomemethionyl-tRNA formyltransferase4e-0858.9
NC_015186:573289:574475574475575380906Acidiphilium multivorum AIU301, complete genomemethionyl-tRNA formyltransferase4e-0858.9
NC_004545:499709:513523513523514494972Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomemethionyl-tRNA formyltransferase6e-0858.5
NC_004061:540354:546330546330547274945Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomemethionyl-tRNA formyltransferase5e-0858.5
NC_010981:712843:727759727759728658900Wolbachia pipientis, complete genomemethionyl-tRNA formyltransferase7e-0858.2
NC_010380:124655:130971130971131516546Streptococcus pneumoniae Hungary19A-6, complete genomephosphoribosylglycinamide formyltransferase7e-0858.2
NC_006055:456711:477395477395478336942Mesoplasma florum L1, complete genomemethyonyl-tRNA formyltransferase1e-0757.8
NC_010103:507482:515230515230516009780Brucella canis ATCC 23365 chromosome I, complete sequenceBifunctional polymyxin resistance arnA protein2e-0757
NC_006932:531000:538209538209538988780Brucella abortus biovar 1 str. 9-941 chromosome I, completeformyltransferase, hypothetical2e-0757
NC_007618:526400:534504534504535283780Brucella melitensis biovar Abortus 2308 chromosome I, completeFormyl transferase, N-terminal2e-0757
NC_010742:529500:536525536525537304780Brucella abortus S19 chromosome 1, complete sequenceFormyl transferase, N-terminal2e-0757
NC_015857:531314:538887538887539666780Brucella pinnipedialis B2/94 chromosome chromosome 1, completeformyltransferase2e-0757
NC_009505:531000:538209538209538988780Brucella ovis ATCC 25840 chromosome I, complete sequenceputative formyltransferase2e-0757
NC_012441:529500:536695536695537474780Brucella melitensis ATCC 23457 chromosome I, complete sequencebifunctional polymyxin resistance protein ArnA2e-0757
NC_013119:511500:518712518712519491780Brucella microti CCM 4915 chromosome 1, complete sequenceformyltransferase, putative2e-0757
NC_014498:99015:105331105331105876546Streptococcus pneumoniae 670-6B chromosome, complete genomephosphoribosylglycinamide formyltransferase2e-0757
NC_008025:2407618:241205924120592413018960Deinococcus geothermalis DSM 11300, complete genomemethionyl-tRNA formyltransferase1e-0757
NC_017248:529500:536741536741537439699Brucella melitensis NI chromosome chromosome I, complete sequenceBifunctional polymyxin resistance protein arnA2e-0756.6
NC_015177:2795487:281931228193122820265954Pedobacter saltans DSM 12145 chromosome, complete genomeformyl transferase domain protein2e-0756.6
NC_004310:508483:516587516587517366780Brucella suis 1330 chromosome I, complete sequenceformyltransferase, putative2e-0756.6
NC_016797:508414:516518516518517297780Brucella suis VBI22 chromosome I, complete sequenceformyltransferase2e-0756.6
NC_017251:508469:516573516573517352780Brucella suis 1330 chromosome I, complete genomeformyltransferase2e-0756.6
NC_010169:527500:534575534575535354780Brucella suis ATCC 23445 chromosome I, complete sequenceBifunctional polymyxin resistance arnA protein2e-0756.6
NC_015666:1672740:168769316876931688370678Halopiger xanaduensis SH-6 chromosome, complete genomeformyl transferase domain-containing protein1e-0653.9
NC_013525:1221604:126102912610291261907879Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeformyl transferase domain protein2e-0653.5
NC_010814:1551624:161965416196541620478825Geobacter lovleyi SZ, complete genomeformyl transferase domain protein2e-0653.5
NC_017259:523840:523840523840524784945Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,methionyl-tRNA formyltransferase6e-0651.6