Pre_GI Gene

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Host: NC_009879 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009879:260000 Rickettsia canadensis str. McKiel, complete genome

Host Lineage: Rickettsia canadensis; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This organism was originally isolated from ticks in a field study on tick-transmitted diseases of small mammals in Canada. Member of the typhus group of Rickettsiales. Members of this genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, are obligate intracellular pathogens. In both groups, the bacteria are transmitted via an insect, usually a tick, to a host organism where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Rickettsia canadensis was originally thought to be a member of the typhus group of Rickettsiales, however, it is now thought to represent a distict group with the rickettsia.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
260074260217144hypothetical protein
260563261450888hypothetical proteinBLASTP
261693261899207hypothetical proteinBLASTP
2632142658982685DNA gyrase subunit AQuickGO ontologyBLASTP
266245266418174hypothetical proteinBLASTP
266693266797105hypothetical proteinBLASTP
266962267489528peptide deformylaseQuickGO ontologyBLASTP
267486268397912methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
268733268897165hypothetical protein
2722492723671195S ribosomal RNAQuickGO ontologyBLASTP
2730322742131182methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
2747332758931161S-adenosylmethioninetRNA ribosyltransferase-isomeraseQuickGO ontologyBLASTP
2765292782981770Multidrug resistance ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
278483278755273hypothetical proteinBLASTP
2789272802911365cytochrome d ubiquinol oxidase subunit IQuickGO ontologyBLASTP
2809752819941020Cytochrome d ubiquinol oxidase subunit IIQuickGO ontologyBLASTP