Pre_GI Gene

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Host: NC_008312 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008312:2690000 Trichodesmium erythraeum IMS101, complete genome

Host Lineage: Trichodesmium erythraeum; Trichodesmium; ; Oscillatoriales; Cyanobacteria; Bacteria

General Information: Trichodesmium erythraeum strain IMS101 was isolated from the North Carolina coast in 1992 and grows in straight filaments. Filamentous marine cyanobacterium. This filamentous marine cyanobacterium is a nitrogen-fixing organism that contribues a significant amount of the global fixed nitrogen each year. These bacteria are unusual in that nitrogen fixation takes place in a differentiated cell called the diazocyte which is different from the nitrogen-fixing differentiated cell (heterocyst) found in other cyanobacteria. The diazocyte is developed in order to protect the oxygen-sensitive nitrogenases and includes a number of changes including production of more membranes and down-regulation of photosynthetic activity during times of peak nitrogen fixation (noontime). This organism gives the Red Sea its name when large blooms appear and is one of the organisms most often associated with large blooms in marine waters.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2690413269048573tRNA-AlaQuickGO ontology
269064926918961248heat shock protein DnaJ-likeQuickGO ontologyBLASTP
269222626932361011methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
26937222694651930NAD kinaseQuickGO ontologyBLASTP
269507326972952223SMP-30GluconolaconaseLRE-like regionQuickGO ontologyBLASTP
269776327017854023Na-Ca exchangerintegrin-beta4QuickGO ontologyBLASTP
270230527049742670Na-Ca exchangerintegrin-beta4QuickGO ontologyBLASTP
27067192707417699stationary-phase survival protein SurEQuickGO ontologyBLASTP