Pre_GI Gene

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Host: NC_002695 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002695:4153394 Escherichia coli O157:H7 str. Sakai, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain of O157:H7 was isolated in a 1997 outbreak in Sakai, Japan. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
41533944153615222hypothetical proteinBLASTP
415404641550711026putative periplasmic binding transport proteinQuickGO ontologyBLASTP
415513941563201182putative transport system permease proteinQuickGO ontologyBLASTP
415632741574331107putative transport system permease proteinQuickGO ontologyBLASTP
41574414158199759putative ATP-binding component of a transport systemQuickGO ontologyBLASTP
415842841585471205S ribosomal RNAQuickGO ontologyBLASTP
4158585415866076tRNA-ThrQuickGO ontologyBLASTP
415867341587921205S ribosomal RNAQuickGO ontologyBLASTP
41588854161787290323S ribosomal RNAQuickGO ontologyBLASTP
4161971416204676tRNA-AlaQuickGO ontologyBLASTP
4162089416216577tRNA-IleQuickGO ontologyBLASTP
41622344163775154216S ribosomal RNAQuickGO ontologyBLASTP
41640324164802771putative transferaseQuickGO ontologyBLASTP
41647784165035258hypothetical proteinBLASTP
41650324165850819shikimate 5-dehydrogenaseQuickGO ontologyBLASTP
41658554166427573hypothetical proteinBLASTP
41664324166737306hypothetical proteinBLASTP
41670034167476474hypothetical proteinBLASTP
416744841685721125hypothetical proteinBLASTP
41687024169211510peptide deformylaseQuickGO ontologyBLASTP
41692264170173948methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
417021941715081290RNA methyltransferaseQuickGO ontologyBLASTP