Pre_GI Gene

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Host: NC_006511 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006511:3364448 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
336444833665472100putative membrane domain involved in signal transduction Diguanylate cyclasephosphodiesterase domain 1 Diguanylate cyclasephosphodiesterase domainQuickGO ontologyBLASTP
33665503367212663transcriptional repressor for envCD acrEF TetRAcrR familyQuickGO ontologyBLASTP
336762633687831158transmembrane protein affecting septum formation and cell membrane permeabilityQuickGO ontologyBLASTP
336879533719083114RND family multidrug transport protein acriflavin resistance protein FQuickGO ontologyBLASTP
33721453372366222possible lipoproteinQuickGO ontologyBLASTP
337313533732541205S ribosomal RNAQuickGO ontologyBLASTP
3373295337336773tRNA-ThrQuickGO ontologyBLASTP
337338033734991205S ribosomal RNAQuickGO ontologyBLASTP
33735913376497290723S ribosomal RNAQuickGO ontologyBLASTP
3376695337676773tRNA-GluQuickGO ontology
33768533378394154216S ribosomal RNAQuickGO ontologyBLASTP
33788693379423555putative transferaseQuickGO ontologyBLASTP
33793993379656258hypothetical proteinBLASTP
33796533380471819shikimate 5-dehydrogenaseQuickGO ontologyBLASTP
33804763381048573hypothetical proteinBLASTP
33810533381595543hypothetical proteinBLASTP
33816223382095474hypothetical proteinBLASTP
338206733831911125hypothetical proteinBLASTP
33833233383832510peptide deformylaseQuickGO ontologyBLASTP
33838483384795948methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
338484733861361290sun proteinQuickGO ontologyBLASTP
338615833875341377potassium transporter peripheral membrane componentQuickGO ontologyBLASTP
33876763388089414large-conductance mechanosensitive channelQuickGO ontologyBLASTP