Pre_GI Gene

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Host: NC_017254 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017254:545236 Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
545236545709474Smg proteinQuickGO ontologyBLASTP
546482547426945methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
54755254794439350S ribosomal protein L17QuickGO ontologyBLASTP
547989548978990DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
54900754962762130S ribosomal protein S4QuickGO ontologyBLASTP
54965355004839630S ribosomal protein S11QuickGO ontologyBLASTP
55006655042235730S ribosomal protein S13QuickGO ontologyBLASTP
55051655063512050S ribosomal protein L36QuickGO ontologyBLASTP
5506585519711314preprotein translocase subunit SecYQuickGO ontologyBLASTP
55242255260118050S ribosomal protein L30QuickGO ontologyBLASTP
55261155311450430S ribosomal protein S5QuickGO ontologyBLASTP
55313055349836950S ribosomal protein L18QuickGO ontologyBLASTP
55350055403653750S ribosomal protein L6QuickGO ontologyBLASTP
55404755443939330S ribosomal protein S8QuickGO ontologyBLASTP
55446855477330630S ribosomal protein S14QuickGO ontologyBLASTP
55479155533054050S ribosomal protein L5QuickGO ontologyBLASTP
55534555565931550S ribosomal protein L24QuickGO ontologyBLASTP
55568555605336950S ribosomal protein L14QuickGO ontologyBLASTP
55616755641825230S ribosomal protein S17QuickGO ontologyBLASTP
55641855661519850S ribosomal protein L29QuickGO ontologyBLASTP
55661555702541150S ribosomal protein L16QuickGO ontologyBLASTP
55776755809933350S ribosomal protein L22QuickGO ontologyBLASTP
55813555841327930S ribosomal protein S19QuickGO ontologyBLASTP
55843355925482250S ribosomal protein L2QuickGO ontologyBLASTP
55926955957130350S ribosomal protein L23QuickGO ontologyBLASTP
55956856017360650S ribosomal protein L4QuickGO ontologyBLASTP
56019156082063050S ribosomal protein L3QuickGO ontologyBLASTP
56085156116231230S ribosomal protein S10QuickGO ontologyBLASTP
5614965626381143elongation factor TuQuickGO ontologyBLASTP