Pre_GI: BLASTP Hits

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Query: NC_004631:685357:704510 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 704510, End: 706876, Length: 2367

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:687000:7044647044647068302367Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,E3 ubiquitin-protein ligase sspH201579
NC_003198:2297837:2297837229783723002032367Salmonella enterica subsp. enterica serovar Typhi str. CT18,secreted effector protein01579
NC_011083:2375061:2388465238846523908312367Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,leucine-rich repeat protein01573
NC_003197:2327474:2340885234088523432512367Salmonella typhimurium LT2, complete genomeleucine-rich repeat protein01573
NC_016810:2325190:2338601233860123409672367Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein01573
NC_016856:2379027:2392438239243823948042367Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein01573
NC_016857:2325190:2338601233860123409672367Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein01573
NC_016860:2323017:2336428233642823387942367Salmonella enterica subsp. enterica serovar Typhimurium strleucine-rich repeat protein01573
NC_016863:2324293:2340630234063023429962367Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein01573
NC_017046:2324554:2337965233796523403312367Salmonella enterica subsp. enterica serovar Typhimurium str. 798secreted effector protein01573
NC_010102:683444:7025587025587049242367Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein01573
NC_011080:2342672:2342672234267223450382367Salmonella enterica subsp. enterica serovar Newport str. SL254,leucine-rich repeat protein01571
NC_011294:2334979:2334979233497923373452367Salmonella enterica subsp. enterica serovar Enteritidis strsecreted effector protein01570
NC_011205:2462025:2462025246202524643912367Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein01570
NC_012125:1517925:1537079153707915392652187Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein01337
NC_011149:1236689:1237394123739412397242331Salmonella enterica subsp. enterica serovar Agona str. SL483,leucine-rich repeat protein01129
NC_010067:892729:9070099070099092762268Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein01108
NC_010067:191190:1956651956651977012037Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0985
NC_016856:1326503:1332051133205113341532103Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SSspH10817
NC_012779:1286500:1320729132072913231072379Edwardsiella ictaluri 93-146, complete genomeleucine-rich repeat protein0774
NC_012779:1286500:1318047131804713201612115Edwardsiella ictaluri 93-146, complete genomeSspH12e-137490
NC_015761:1181186:1188971118897111914122442Salmonella bongori NCTC 12419, complete genomeleucine rich repeat virulence protein5e-122439
NC_007384:1320287:1346060134606013478111752Shigella sonnei Ss046, complete genomeinvasion plasmid antigen2e-103377
NC_010465:804249:8208868208868227331848Yersinia pseudotuberculosis YPIII, complete genomeantigenic leucine-rich repeat protein3e-103376
NC_017168:4509918:4526115452611545279951881Yersinia pestis A1122 chromosome, complete genomeputative antigenic leucine-rich repeat protein8e-99362
NC_008149:3648139:3669702366970236715821881Yersinia pestis Nepal516, complete genomeantigenic leucine-rich repeat protein8e-99362
NC_008150:3711953:3723173372317337250531881Yersinia pestis Antiqua, complete genomeputative antigenic leucine-rich repeat protein8e-99362
NC_017154:848500:8700868700868719331848Yersinia pestis D106004 chromosome, complete genomeantigenic leucine-rich repeat protein2e-98360
NC_010465:804249:8173048173048191721869Yersinia pseudotuberculosis YPIII, complete genomeputative antigenic leucine-rich repeat protein5e-97355
NC_017319:192482:2130342130342147611728Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceinvasion plasmid antigen, secreted by the Mxi-Spa secretion machinery1e-95351
NC_004851:191709:2131522131522148791728Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceinvasion plasmid antigen, secreted by the Mxi-Spa secretion machinery1e-95351
NC_015761:1181186:1206110120611012087912682Salmonella bongori NCTC 12419, complete genomeleucine rich-repeat virulence protein5e-93342
NC_004741:2009769:2023205202320520248481644Shigella flexneri 2a str. 2457T, complete genomeinvasion plasmid antigen2e-92340
NC_008258:2045000:2055196205519620568391644Shigella flexneri 5 str. 8401, complete genomeinvasion plasmid antigen2e-92340
NC_017328:2090679:2102130210213021037731644Shigella flexneri 2002017 chromosome, complete genomeInvasion plasmid antigen2e-92340
NC_007613:1038000:1044320104432010459631644Shigella boydii Sb227, complete genomeinvasion plasmid antigen2e-92340
NC_017168:4509918:4522652452265245244691818Yersinia pestis A1122 chromosome, complete genomeputative antigenic leucine-rich repeat protein4e-89329
NC_017154:848500:8665908665908684071818Yersinia pestis D106004 chromosome, complete genomeputative antigenic leucine-rich repeat protein4e-89329
NC_008150:3711953:3727411372741137292281818Yersinia pestis Antiqua, complete genomeputative antigenic leucine-rich repeat protein4e-89329
NC_008149:3648139:3666229366622936680551827Yersinia pestis Nepal516, complete genomeantigenic leucine-rich repeat protein1e-88328
NC_011205:1107998:111844311184431119411969Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secreted effector protein3e-75283
NC_011294:1006630:101781610178161018784969Salmonella enterica subsp. enterica serovar Enteritidis strtype III secreted protein3e-75283
NC_017249:8165826:8165826816582681675711746Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-71271
NC_004463:2059500:2059723205972320614801758Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein1e-71271
NC_010067:2304313:2319780231978023208591080Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-71270
NC_007607:87000:1104271104271119711545Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceinvasion plasmid antigen, fragment4e-57223
NC_010067:1782998:1799793179979318009831191Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-36154
NC_010465:804249:819734819734820639906Yersinia pseudotuberculosis YPIII, complete genomeantigenic leucine-rich repeat protein3e-34147
NC_008255:3331613:3332977333297733352682292Cytophaga hutchinsonii ATCC 33406, complete genomeconserved hypothetical protein with multiple leucine-rich repeat domains5e-29130
NC_008150:3711953:372561637256163726491876Yersinia pestis Antiqua, complete genomeputative antigenic leucine-rich repeat protein2e-28128
NC_008149:3648139:366826436682643669139876Yersinia pestis Nepal516, complete genomeantigenic leucine-rich repeat protein2e-28128
NC_017154:848500:868615868615869490876Yersinia pestis D106004 chromosome, complete genomeputative antigenic leucine-rich repeat protein2e-28128
NC_017168:4509918:452467745246774525552876Yersinia pestis A1122 chromosome, complete genomeputative antigenic leucine-rich repeat protein2e-28128
NC_010337:98974:1205681205681293908823Heliobacterium modesticaldum Ice1, complete genomemultidomain protein with s-layer homology region, glug motif, ig motif, i-set domain, pkd domain1e-27125
NC_006155:3237990:3239683323968332408221140Yersinia pseudotuberculosis IP 32953, complete genomeputative antigenic leucine-rich repeat protein2e-21104
NC_010634:3155741:3157433315743331585721140Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-21104
NC_017249:8283701:831025483102548310592339Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-1274.3
NC_004463:1898648:194677319467731947111339Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein3e-1274.3
NC_013929:3953046:396206539620653962988924Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein7e-1169.7
NC_011094:1683979:1692014169201416932401227Salmonella enterica subsp. enterica serovar Schwarzengrund strsecreted effector protein3e-1067.8
NC_016810:1670112:1678146167814616793721227Salmonella enterica subsp. enterica serovar Typhimurium strtranslocated effector protein (SseJ)9e-1066.2
NC_012125:2143246:2155962215596221571881227Salmonella enterica subsp. enterica serovar Paratyphi C straineffector protein9e-1066.2
NC_006905:1726416:1734452173445217356781227Salmonella enterica subsp. enterica serovar Choleraesuis strtranslocated effector: regulated by SPI-29e-1066.2
NC_003197:1713259:1721293172129317225191227Salmonella typhimurium LT2, complete genomesecreted effector protein9e-1066.2
NC_016856:1723236:1731270173127017324961227Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecreted effector protein9e-1066.2
NC_016857:1670112:1678146167814616793721227Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secreted effector protein9e-1066.2
NC_016860:1710950:1718984171898417202101227Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein9e-1066.2
NC_016863:1671428:1679462167946216806881227Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secreted effector protein9e-1066.2
NC_017046:1669995:1678029167802916792551227Salmonella enterica subsp. enterica serovar Typhimurium str. 798translocated effector protein (SseJ)9e-1066.2
NC_010102:1388344:1401046140104614022721227Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-1066.2
NC_011080:1709612:1717646171764617188721227Salmonella enterica subsp. enterica serovar Newport str. SL254,secreted effector protein1e-0965.9
NC_016831:1468691:1476725147672514779511227Salmonella enterica subsp. enterica serovar Gallinarum/pullorumtranslocated effector protein (SseJ)1e-0965.5
NC_011274:1544653:1557372155737215585981227Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91translocated effector protein SseJ1e-0965.5
NC_011294:1493849:1506566150656615077921227Salmonella enterica subsp. enterica serovar Enteritidis strtranslocated effector protein SseJ2e-0965.5
NC_011205:1633353:1646088164608816473141227Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secreted effector protein2e-0965.5
NC_011083:1761352:1769395176939517706211227Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,secreted effector protein2e-0965.1
NC_011149:1429523:1484636148463614858621227Salmonella enterica subsp. enterica serovar Agona str. SL483,secreted effector protein1e-0862.4
NC_010067:1300606:1307720130772013090001281Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-0860.5
NC_003197:2720726:2728976272897627304691494Salmonella typhimurium LT2, complete genomeleucine-rich repeat protein2e-0758.5
NC_016856:2773995:2780529278052927820221494Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-0758.5
NC_016857:2719779:2726693272669327281861494Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-0758.5
NC_016863:2721826:2728740272874027302331494Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-0758.5
NC_011080:2722492:2729050272905027305191470Salmonella enterica subsp. enterica serovar Newport str. SL254,leucine-rich repeat protein2e-0758.5
NC_016810:2719779:2726717272671727281861470Salmonella enterica subsp. enterica serovar Typhimurium strleucine rich hypothetical protein2e-0758.5
NC_016860:2716152:2724426272442627258951470Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-0758.5
NC_017046:2717810:2726084272608427275531470Salmonella enterica subsp. enterica serovar Typhimurium str. 798leucine rich hypothetical protein2e-0758.5
NC_015376:2010009:2029236202923620305641329Burkholderia gladioli BSR3 chromosome chromosome 2, completeProtein kinase2e-0655.1
NC_008255:908881:9254539254539270241572Cytophaga hutchinsonii ATCC 33406, complete genomeconserved hypothetical protein; LRR-related protein8e-0653.1